RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 FMO5P49326 533 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 TATDN1Q6P1N9 297 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 C1orf186Q6ZWK4 172 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ZC3H3Q8IXZ2 948 aaKnown RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 BTBD6Q96KE9 485 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF577Q9BSK1 485 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 TAF1DQ9H5J8 278 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ERVK-5Q9HDB9 667 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 SHTN1A0MZ66 631 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PGRMC1O00264 195 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 CTNNA1P35221 906 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PSMC2P35998 433 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 GCLMP48507 274 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 MARCKSL1P49006 195 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 STAT2P52630 851 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 ODF2Q5BJF6 829 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 FBXW10Q5XX13 1052 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PODNQ7Z5L7 613 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 MASTLQ96GX5 879 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 AGBL1Q96MI9 1066 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 FAM20AQ96MK3 541 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PARVGQ9HBI0 331 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PLCB1Q9NQ66 1216 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 F8VZ95 297 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 HIP1RO75146 1068 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 ATP2C2O75185 946 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 JAM2P57087 298 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 GLE1Q53GS7 698 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 NT5DC3Q86UY8 548 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 INTS2Q9H0H0 1204 aaKnown RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 UBE2TQ9NPD8 197 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-207ENST00000528288 GPRC5CQ9NQ84 441 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 COG5Q9UP83 839 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 E7EVH7 732 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 LSP1P33241 339 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 SOX5P35711 763 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 KRT27Q7Z3Y8 459 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 ARHGEF19Q8IW93 802 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 IL31RAQ8NI17 732 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.1□□□□□ -1.117e-6■■□□□ 11.5
C11orf54-207ENST00000528288 LXNQ9BS40 222 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 AGPAT3Q9NRZ7 376 aa8.1□□□□□ -1.11
C11orf54-207ENST00000528288 YDJCA8MPS7 323 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 GCOM1H8Y6P7 765 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 K7ENM7 598 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 C21orf2O43822 256 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 PSMD10O75832 226 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 POLR2MP0CAP2 368 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 TNFAIP3P21580 790 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 MAGEA9P43362 315 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 TTC31Q49AM3 519 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 RNF187Q5TA31 235 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 STRIP1Q5VSL9 837 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF720Q7Z2F6 126 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 VPS36Q86VN1 386 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 MDM1Q8TC05 714 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 BORCS6Q96GS4 357 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 CBWD1Q9BRT8 395 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 KIFC3Q9BVG8 833 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 WDR11Q9BZH6 1224 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 TMEM39BQ9GZU3 492 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 GLT8D2Q9H1C3 349 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 TMEM59LQ9UK28 342 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 SCN9AQ15858 1988 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 UBR3Q6ZT12 1888 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 TLDC2A0PJX2 215 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 APBA3O96018 575 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 FOSP01100 380 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 KRT13P13646 458 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 HSPA1LP34931 641 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 PDE6BP35913 854 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 SOX10P56693 466 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 MYL7Q01449 175 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 DHX9Q08211 1270 aaKnown RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 NSMFQ6X4W1 530 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 OLIG1Q8TAK6 271 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 ALG3Q92685 438 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 KRT35Q92764 455 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 KAT2BQ92831 832 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 ATP6V1G3Q96LB4 118 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 FIZ1Q96SL8 496 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 IDI2Q9BXS1 227 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 ISCUQ9H1K1 167 aa8.09□□□□□ -1.11
C11orf54-207ENST00000528288 METTL14Q9HCE5 456 aaKnown RBP8.09□□□□□ -1.11
C11orf54-207ENST00000528288 RNF14Q9UBS8 474 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms