RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ZHX3Q9H4I2 956 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 XPNPEP3Q9NQH7 507 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 PANK4Q9NVE7 773 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 LIMA1Q9UHB6 759 aaKnown RBP20.73■□□□□ 0.91
SMPD1-203ENST00000527275 ZNF215Q9UL58 517 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-203ENST00000527275 TRPC6Q9Y210 931 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 SFI1A8K8P3 1242 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 GUCY2CP25092 1073 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 LBX1P52954 281 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 HMX1Q9NP08 348 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-203ENST00000527275 SLC39A2Q9NP94 309 aa20.73■□□□□ 0.91
SMPD1-203ENST00000527275 DDX20Q9UHI6 824 aaKnown RBP20.73■□□□□ 0.91
SMPD1-203ENST00000527275 TEX33O43247 280 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 HSPA1AP0DMV8 641 aaKnown RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 HSPA1BP0DMV9 641 aaKnown RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 CCNE1P24864 410 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 TBX2Q13207 712 aaPredicted RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 TARBP2Q15633 366 aaKnown RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 TCP11X2Q5H9J9 407 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 DNTTIP2Q5QJE6 756 aaKnown RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 KIAA0895Q8NCT3 520 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 ANKRD20A12PQ8NF67 263 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 CEP89Q96ST8 783 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 FRMD3A2A2Y4 597 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 ZBTB42B2RXF5 422 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 KCNJ18B7U540 433 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 ADAMTS4O75173 837 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 DGAT1O75907 488 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 EHHADHQ08426 723 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 COASYQ13057 564 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 KCNJ12Q14500 433 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 KRT31Q15323 416 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 TTI2Q6NXR4 508 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 CCDC65Q8IXS2 484 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 KAT2BQ92831 832 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 P2RX5Q93086 422 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 UPF3AQ9H1J1 476 aaKnown RBP20.72■□□□□ 0.91
SMPD1-203ENST00000527275 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
SMPD1-203ENST00000527275 ARID2Q68CP9 1835 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 BICDL2A1A5D9 508 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 HIP1RO75146 1068 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 TBCAO75347 108 aaKnown RBP20.71■□□□□ 0.91
SMPD1-203ENST00000527275 F2P00734 622 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 PSMD2Q13200 908 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 HERC4Q5GLZ8 1057 aaPredicted RBP20.71■□□□□ 0.91
SMPD1-203ENST00000527275 CREBRFQ8IUR6 639 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 DAW1Q8N136 415 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 SRRTQ9BXP5 876 aaKnown RBP20.71■□□□□ 0.91
SMPD1-203ENST00000527275 GPRC5CQ9NQ84 441 aa20.71■□□□□ 0.91
SMPD1-203ENST00000527275 NRDCO43847 1150 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 HBP1O60381 514 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 MYCNP04198 464 aaPredicted RBP20.7■□□□□ 0.91
SMPD1-203ENST00000527275 MYL3P08590 195 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 POLGP54098 1239 aaPredicted RBP20.7■□□□□ 0.91
SMPD1-203ENST00000527275 SOX10P56693 466 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 CHMP4BP1P59074 171 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 SLC9C1Q4G0N8 1177 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 IRF2BP1Q8IU81 584 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 THAP9Q9H5L6 903 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 PDLIM7Q9NR12 457 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 ODF2LQ9ULJ1 636 aa20.7■□□□□ 0.91
SMPD1-203ENST00000527275 MAPK7Q13164 816 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 ANKRD40Q6AI12 368 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 NOC3LQ8WTT2 800 aaKnown RBP20.7■□□□□ 0.9
SMPD1-203ENST00000527275 TRAPPC12Q8WVT3 735 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 SLC7A3Q8WY07 619 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 DUSP9Q99956 384 aaKnown RBP20.7■□□□□ 0.9
SMPD1-203ENST00000527275 DHX33Q9H6R0 707 aaKnown RBP20.7■□□□□ 0.9
SMPD1-203ENST00000527275 XPNPEP1Q9NQW7 623 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 TBC1D7Q9P0N9 293 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 COL4A3BPQ9Y5P4 624 aa20.7■□□□□ 0.9
SMPD1-203ENST00000527275 FAM13AO94988 1023 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 MYCP01106 439 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-203ENST00000527275 INSRRP14616 1297 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 COPB1P53618 953 aaKnown RBP20.69■□□□□ 0.9
SMPD1-203ENST00000527275 NKX3-2P78367 333 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 PURAQ00577 322 aaKnown RBP20.69■□□□□ 0.9
SMPD1-203ENST00000527275 KIAA0753Q2KHM9 967 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 PARVGQ9HBI0 331 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 N4BP3O15049 544 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 CTCFP49711 727 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-203ENST00000527275 ZNF131P52739 623 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 TBC1D8BQ0IIM8 1120 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 EMC2Q15006 297 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 FAM102BQ5T8I3 360 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 LHX8Q68G74 356 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 SFR1Q86XK3 245 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 CSGALNACT2Q8N6G5 542 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 PPP1R13LQ8WUF5 828 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 VPS16Q9H269 839 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 ATP6V0A4Q9HBG4 840 aa20.69■□□□□ 0.9
SMPD1-203ENST00000527275 MSCO60682 206 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 PBX1P40424 430 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 IGBP1P78318 339 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 FAM26FQ5R3K3 315 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 CTU1Q7Z7A3 348 aaKnown RBP20.68■□□□□ 0.9
SMPD1-203ENST00000527275 MYCT1Q8N699 235 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 GLIS3Q8NEA6 775 aa20.68■□□□□ 0.9
SMPD1-203ENST00000527275 MCPH1Q8NEM0 835 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms