RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 KSR1Q8IVT5 923 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 NLRP7Q8WX94 980 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 TOP1MTQ969P6 601 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 CCDC43Q96MW1 224 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 FTHL17Q9BXU8 183 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 ZNF576Q9H609 170 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 MTMR10Q9NXD2 777 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 DBR1Q9UK59 544 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 ARID2Q68CP9 1835 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 PP2D1A8MPX8 630 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 TLL1O43897 1013 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 UPP2O95045 317 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 BMP15O95972 392 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 CDC25AP30304 524 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 KRT79Q5XKE5 535 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 FAM228AQ86W67 206 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 TCP11Q8WWU5 503 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 PRPF31Q8WWY3 499 aaKnown RBP18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 SCLT1Q96NL6 688 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 RAD9AQ99638 391 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 MTRQ99707 1265 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 ZSCAN16Q9H4T2 348 aaPredicted RBP18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 SLC28A3Q9HAS3 691 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 KIAA1024Q9UPX6 916 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 TTC3P53804 2025 aa18.08■□□□□ 0.48
SSSCA1-202ENST00000526433 A0A087WZ62 844 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 ASAP2O43150 1006 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 GAS2O43903 313 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 DGAT1O75907 488 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 DARSP14868 501 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 FAM43BQ6ZT52 329 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 LINC01599Q8WXQ3 324 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 GCOM2Q9BZD3 368 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 XPNPEP1Q9NQW7 623 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
SSSCA1-202ENST00000526433 CSDE1O75534 798 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 CA3P07451 260 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 SRGAP2CP0DJJ0 459 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 PDIA4P13667 645 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 MMTAG2Q9BU76 263 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 ATP6V0A4Q9HBG4 840 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 INSL6Q9Y581 213 aa18.06■□□□□ 0.48
SSSCA1-202ENST00000526433 LCHNA4D1U4 455 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 MGEA5O60502 916 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 FGFR4P22455 802 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 ARL2P36404 184 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 PPP2R2DQ66LE6 453 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 PADI6Q6TGC4 694 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 NLRP4Q96MN2 994 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 ADAM2Q99965 735 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 INO80BQ9C086 356 aaPredicted RBP18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
SSSCA1-202ENST00000526433 DENND3A2RUS2 1198 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 ARHGEF35A5YM69 484 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 USO1O60763 962 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 SLC34A2O95436 690 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 HTRA4P83105 476 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 DSC3Q14574 896 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 MXD4Q14582 209 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 PTPAQ15257 358 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 MAEAQ7L5Y9 396 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 AK8Q96MA6 479 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 GUCD1Q96NT3 240 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 IFT122Q9HBG6 1241 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 RGS18Q9NS28 235 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 DNM3Q9UQ16 869 aa18.04■□□□□ 0.48
SSSCA1-202ENST00000526433 E9PMD0 336 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 ARHGEF15O94989 841 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 CYP11B2P19099 503 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 TAP1Q03518 808 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 GRIN1Q05586 938 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 RNF149Q8NC42 400 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 PNMA5Q96PV4 448 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 USP28Q96RU2 1077 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 CDX2Q99626 313 aaPredicted RBP18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 BHMT2Q9H2M3 363 aa18.03■□□□□ 0.48
SSSCA1-202ENST00000526433 EYA4O95677 639 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 IBSPP21815 317 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 GLRA2P23416 452 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 MARCKSP29966 332 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 LONP1P36776 959 aaKnown RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 UBA7P41226 1012 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms