RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 BRD3Q15059 726 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 LLGL1Q15334 1064 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 SRGAP1Q7Z6B7 1085 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 CATSPER3Q86XQ3 398 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 TMEM139Q8IV31 216 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 HAS1Q92839 578 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 CENPOQ9BU64 300 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 FGFBP2Q9BYJ0 223 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 IKZF4Q9H2S9 585 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 HAUS4Q9H6D7 363 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 ESYT2A0FGR8 921 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 FTCDO95954 541 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 FOSP01100 380 aaPredicted RBP10.71□□□□□ -0.7
USP35-201ENST00000526425 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.7
USP35-201ENST00000526425 MYBP10242 640 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 KIF11P52732 1056 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 VSNL1P62760 191 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 SPP2Q13103 211 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.7
USP35-201ENST00000526425 ZC2HC1CQ53FD0 456 aaPredicted RBP10.71□□□□□ -0.7
USP35-201ENST00000526425 GET4Q7L5D6 327 aaPredicted RBP10.71□□□□□ -0.7
USP35-201ENST00000526425 SAPCD2Q86UD0 394 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 EIF2AK1Q9BQI3 630 aaKnown RBP10.71□□□□□ -0.7
USP35-201ENST00000526425 REEP2Q9BRK0 252 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 DOCK2Q92608 1830 aa10.71□□□□□ -0.7
USP35-201ENST00000526425 FAM86B1E9PN63 330 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 FAM86B2P0C5J1 330 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 JAG1P78504 1218 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 LDHDQ86WU2 507 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 DRAXINQ8NBI3 349 aaPredicted RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 EHBP1Q8NDI1 1231 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 CCDC127Q96BQ5 260 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 PNKPQ96T60 521 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 BLOC1S6Q9UL45 172 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 LRRN2O75325 713 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 PAPOLAP51003 745 aaKnown RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 C2orf54Q08AI8 447 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 PPP1R7Q15435 360 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 KIAA0753Q2KHM9 967 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 ARHGAP22Q7Z5H3 698 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 ADAT2Q7Z6V5 191 aaKnown RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 GUF1Q8N442 669 aaKnown RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 CTNNBL1Q8WYA6 563 aaPredicted RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 BCAS3Q9H6U6 928 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 PACSIN2Q9UNF0 486 aaPredicted RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 PVALEFA0A1B0GWK0 134 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 K7ENM7 598 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 NFKBIEO00221 500 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 HGSO14964 777 aaPredicted RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 RPL13P26373 211 aaKnown RBP10.7□□□□□ -0.7
USP35-201ENST00000526425 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP35-201ENST00000526425 PDIA5Q14554 519 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 C16orf87Q6PH81 154 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 VPS36Q86VN1 386 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 NLGN2Q8NFZ4 835 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 L3MBTL1Q9Y468 752 aa10.7□□□□□ -0.7
USP35-201ENST00000526425 GOLGA8IPA6NC78 632 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 GOLGA8JA6NMD2 632 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 LRRIQ3A6PVS8 624 aaPredicted RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 EPHB6O15197 1021 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 MSH4O15457 936 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 CALUO43852 315 aaPredicted RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 KRT13P13646 458 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 SLC7A5Q01650 507 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 FAM102BQ5T8I3 360 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 FAM83AQ86UY5 434 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 WHAMMQ8TF30 809 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 ABTB1Q969K4 478 aaPredicted RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 STAMBPL1Q96FJ0 436 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 MTMR9Q96QG7 549 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 DEFB129Q9H1M3 183 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 PPANQ9NQ55 473 aaKnown RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 CAPN11Q9UMQ6 739 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 SLX4Q8IY92 1834 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 OPLAHO14841 1288 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 ARHGAP25P42331 645 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 EHHADHQ08426 723 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 MPP3Q13368 585 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 HIBCHQ6NVY1 386 aaPredicted RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 KLHL7Q8IXQ5 586 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 U2AF1L4Q8WU68 220 aaKnown RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 IQCGQ9H095 443 aaKnown RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 PDHA1P08559 390 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 TRIM49P0CI25 452 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 TRIM49CP0CI26 452 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 CYP11B2P19099 503 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 GGCXP38435 758 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 LRRC63Q05C16 580 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 EXOC3L4Q17RC7 722 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 XKR9Q5GH70 373 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 ARHGEF16Q5VV41 709 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms