RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SUCLG2Q96I99 432 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 C9orf78Q9NZ63 289 aaPredicted RBP6.45□□□□□ -1.38
SVIP-202ENST00000525670 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 NPHP3-ACAD11A0A0J9YXS1 232 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 ANKRD34BA5PLL1 514 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 GRM8O00222 908 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 PDE8AO60658 829 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 PPP1R11O60927 126 aaPredicted RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 ASGR2P07307 311 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 NBPF7P0C2Y1 421 aaPredicted RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 TRIM27P14373 513 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 PAMP19021 973 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 KCNC1P48547 511 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 SLURP1P55000 103 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 GRAPQ13588 217 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 SLC9A5Q14940 896 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 CCDC152Q4G0S7 254 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 ERICH6BQ5W0A0 696 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 KIAA1211LQ6NV74 962 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 FRMD5Q7Z6J6 570 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 CPNE8Q86YQ8 564 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 ZNF513Q8N8E2 541 aaPredicted RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 NETO2Q8NC67 525 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 LINS1Q8NG48 757 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 GRAPLQ8TC17 118 aaPredicted RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 FNIP1Q8TF40 1166 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 ALG3Q92685 438 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 PEX11GQ96HA9 241 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 MTA3Q9BTC8 594 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 CHMP4AQ9BY43 222 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 AKT3Q9Y243 479 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 RWDD3Q9Y3V2 267 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 DICER1Q9UPY3 1922 aaKnown RBP6.44□□□□□ -1.38
SVIP-202ENST00000525670 RNF123Q5XPI4 1314 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 ZNF541Q9H0D2 1346 aa6.44□□□□□ -1.38
SVIP-202ENST00000525670 LTBP1Q14766 1721 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 KLRG2A4D1S0 409 aaPredicted RBP6.43□□□□□ -1.38
SVIP-202ENST00000525670 SNAP23O00161 211 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 PPIP5K2O43314 1243 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
SVIP-202ENST00000525670 ALDH1B1P30837 517 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 GPSM2P81274 684 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 HTRA3P83110 453 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 ALDH1L2Q3SY69 923 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 TAF7LQ5H9L4 462 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 VHLLQ6RSH7 139 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 DPP8Q6V1X1 898 aaPredicted RBP6.43□□□□□ -1.38
SVIP-202ENST00000525670 ITPRIPQ8IWB1 547 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 FTSJ3Q8IY81 847 aaKnown RBP6.43□□□□□ -1.38
SVIP-202ENST00000525670 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 TEPSINQ96N21 525 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 MEIS3Q99687 375 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 APBA2Q99767 749 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 TGIF2Q9GZN2 237 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 BICC1Q9H694 974 aaKnown RBP6.43□□□□□ -1.38
SVIP-202ENST00000525670 NMRK2Q9NPI5 230 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 NUDT5Q9UKK9 219 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 STRIP2Q9ULQ0 834 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 PMF1-BGLAPU3KQ54 211 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 PTPRCP08575 1304 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 CDHR2Q9BYE9 1310 aa6.43□□□□□ -1.38
SVIP-202ENST00000525670 UFL1O94874 794 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 KLRK1P26718 216 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 ZNF143P52747 638 aaPredicted RBP6.42□□□□□ -1.38
SVIP-202ENST00000525670 VWA3BQ502W6 1294 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 SLC10A5Q5PT55 438 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 POMZP3Q6PJE2 187 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 LMBR1LQ6UX01 489 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 B3GNT8Q7Z7M8 397 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 SAPCD2Q86UD0 394 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 ANKRD18AQ8IVF6 992 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 CRACR2BQ8N4Y2 399 aaPredicted RBP6.42□□□□□ -1.38
SVIP-202ENST00000525670 TMEM57Q8N5G2 664 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 TTLL11Q8NHH1 800 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 CRAMP1Q96RY5 1269 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 API5Q9BZZ5 524 aaKnown RBP6.42□□□□□ -1.38
SVIP-202ENST00000525670 SIL1Q9H173 461 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 TMX4Q9H1E5 349 aaPredicted RBP6.42□□□□□ -1.38
SVIP-202ENST00000525670 DBNDD1Q9H9R9 158 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 RXFP1Q9HBX9 757 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.42□□□□□ -1.381e-6■■■■□ 21.3
SVIP-202ENST00000525670 GULP1Q9UBP9 304 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 FBLN5Q9UBX5 448 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 JAG2Q9Y219 1238 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 EMC9Q9Y3B6 208 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 LRRFIP2Q9Y608 721 aaKnown RBP6.42□□□□□ -1.38
SVIP-202ENST00000525670 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
SVIP-202ENST00000525670 C7orf72A4D263 438 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 SH3D21A4FU49 640 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 NPHS1O60500 1241 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 TAF5LO75529 589 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 ALDH1L1O75891 902 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 CELA3BP08861 270 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 UBTFL1P0CB47 393 aaPredicted RBP6.41□□□□□ -1.38
SVIP-202ENST00000525670 PMLP29590 882 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms