RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 ADRB1P08588 477 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 RBP3P10745 1247 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 GJA4P35212 333 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 ITGA1P56199 1179 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 NKX3-2P78367 333 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 PAN2Q504Q3 1202 aaKnown RBP7.66□□□□□ -1.18
SKP1-213ENST00000524288 GPR158Q5T848 1215 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 FAM102BQ5T8I3 360 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 FRMD7Q6ZUT3 714 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 TTC8Q8TAM2 541 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 ASB15Q8WXK1 588 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 C16orf92Q96LL3 132 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 GBP4Q96PP9 640 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 QRSL1Q9H0R6 528 aaKnown RBP7.66□□□□□ -1.18
SKP1-213ENST00000524288 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 EDARQ9UNE0 448 aa7.66□□□□□ -1.18
SKP1-213ENST00000524288 APOL3O95236 402 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 CFBP00751 764 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 MC4RP32245 332 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 SRSF2Q01130 221 aaKnown RBP7.65□□□□□ -1.18
SKP1-213ENST00000524288 KIAA2012Q0VF49 1180 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 TRIM48Q8IWZ4 208 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 ZZZ3Q8IYH5 903 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 CPA6Q8N4T0 437 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 FAM26EQ8N5C1 309 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 LRGUKQ96M69 825 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 SLC13A1Q9BZW2 595 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 ZBTB21Q9ULJ3 1066 aa7.65□□□□□ -1.18
SKP1-213ENST00000524288 PRAMEF22A3QJZ6 481 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 K7ESM1 405 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 OSMP13725 252 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 SDHAP31040 664 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 CNR2P34972 360 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 GNALP38405 381 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 RECQLP46063 649 aaPredicted RBP7.64□□□□□ -1.19
SKP1-213ENST00000524288 CR1LQ2VPA4 569 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 TOR2AQ5JU69 321 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 PRAMEF18Q5VWM3 479 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 CCDC62Q6P9F0 684 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 FAM124AQ86V42 546 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 CXorf67Q86X51 503 aaPredicted RBP7.64□□□□□ -1.19
SKP1-213ENST00000524288 TCEAL8Q8IYN2 117 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 MAGEB6Q8N7X4 407 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 C7orf31Q8N865 590 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 TOE1Q96GM8 510 aaKnown RBP7.64□□□□□ -1.19
SKP1-213ENST00000524288 DNAJC28Q9NX36 388 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 DTLQ9NZJ0 730 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 RBPJLQ9UBG7 517 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 MRFAP1Q9Y605 127 aa7.64□□□□□ -1.19
SKP1-213ENST00000524288 IL33O95760 270 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 LPLP06858 475 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 STAT5AP42229 794 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 FNTBP49356 437 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 EPHA7Q15375 998 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 PRR31Q5SQ13 230 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 ZBTB41Q5SVQ8 909 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 EAF2Q96CJ1 260 aaPredicted RBP7.63□□□□□ -1.19
SKP1-213ENST00000524288 TEKT5Q96M29 485 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 SLC2A13Q96QE2 648 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 TUBGCP5Q96RT8 1024 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 UCKL1Q9NWZ5 548 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 DUSP10Q9Y6W6 482 aa7.63□□□□□ -1.19
SKP1-213ENST00000524288 UBA6A0AVT1 1052 aaPredicted RBP7.62□□□□□ -1.19
SKP1-213ENST00000524288 C9orf118A6NHY6 69 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 ELL2O00472 640 aaPredicted RBP7.62□□□□□ -1.19
SKP1-213ENST00000524288 KIF3BO15066 747 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 PEX14O75381 377 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 RFPL1O75677 317 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 FAHP16930 419 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 MANFP55145 182 aaKnown RBP7.62□□□□□ -1.19
SKP1-213ENST00000524288 EFCAB2Q5VUJ9 269 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 PRAMEF9Q5VWM5 478 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 BORAQ6PGQ7 559 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 SLC4A10Q6U841 1118 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 RTN4RL1Q86UN2 441 aaPredicted RBP7.62□□□□□ -1.19
SKP1-213ENST00000524288 CMTR2Q8IYT2 770 aaKnown RBP7.62□□□□□ -1.19
SKP1-213ENST00000524288 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 POLR3GLQ9BT43 218 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 MYL10Q9BUA6 226 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 SLC39A2Q9NP94 309 aa7.62□□□□□ -1.19
SKP1-213ENST00000524288 KLHL33A6NCF5 533 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 TRIM75PA6NK02 468 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 VSTM5A8MXK1 200 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 CYP7B1O75881 506 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ADAM9Q13443 819 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 TMEM240Q5SV17 173 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 NXNQ6DKJ4 435 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ESPNLQ6ZVH7 1005 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 LGI4Q8N135 537 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 JADE3Q92613 823 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 FERMT2Q96AC1 680 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 FOXRED1Q96CU9 486 aaPredicted RBP7.61□□□□□ -1.19
SKP1-213ENST00000524288 HSPBAP1Q96EW2 488 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 ACAP3Q96P50 834 aa7.61□□□□□ -1.19
SKP1-213ENST00000524288 PRDM12Q9H4Q4 367 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms