RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 MTERF2Q49AM1 385 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 EXOC8Q8IYI6 725 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 THNSL1Q8IYQ7 743 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 LRRC43Q8N309 656 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 KLHL23Q8NBE8 558 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 ETNPPLQ8TBG4 499 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 RSPH1Q8WYR4 309 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 FAM20AQ96MK3 541 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 POP1Q99575 1024 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 GCOM2Q9BZD3 368 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 ADAMTS10Q9H324 1103 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 ALG13Q9NP73 1137 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 DACT1Q9NYF0 836 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 PPME1Q9Y570 386 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 C9IYK1 514 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 M0R2N6 131 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 TBX3O15119 743 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 MGEA5O60502 916 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 CCNT1O60563 726 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 ITGB1P05556 798 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 NDUFV1P49821 464 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 GATMP50440 423 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 HYAL1Q12794 435 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 SMAD4Q13485 552 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 TRIM29Q14134 588 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 SMAD2Q15796 467 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 PPP4R3AQ6IN85 833 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 PIK3AP1Q6ZUJ8 805 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 ALYREFQ86V81 257 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 ZNF410Q86VK4 478 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 SLFN12Q8IYM2 578 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 LINC01465Q8N7H1 131 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 MICAL1Q8TDZ2 1067 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 POF1BQ8WVV4 589 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 SLC7A3Q8WY07 619 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 MFSD14AQ96MC6 490 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 MBOAT7Q96N66 472 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 AIFM3Q96NN9 605 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 PHF20Q9BVI0 1012 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 MRPL9Q9BYD2 267 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 NIFKQ9BYG3 293 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 INO80BQ9C086 356 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 IGFLR1Q9H665 355 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 TLR9Q9NR96 1032 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 ORC3Q9UBD5 711 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 TPCN1Q9ULQ1 816 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 KCNJ14Q9UNX9 436 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 ZNF318Q5VUA4 2279 aa9.95□□□□□ -0.82
CTNNA1-240ENST00000523912 REV3LO60673 3130 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 SLC37A4O43826 429 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 BAG4O95429 457 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 FGFR1P11362 822 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 SKIP12755 728 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 KRT2P35908 639 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 QARSP47897 775 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 AK2P54819 239 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 PPP2R5CQ13362 524 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 DSC3Q14574 896 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 NPY5RQ15761 445 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 HERC4Q5GLZ8 1057 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 BMP8AQ7Z5Y6 402 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 EFHBQ8N7U6 833 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 COLGALT1Q8NBJ5 622 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 RNF169Q8NCN4 708 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 SPPL3Q8TCT6 385 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 GJA10Q969M2 543 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 CCDC43Q96MW1 224 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 CDCA3Q99618 268 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 SUCLA2Q9P2R7 463 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 CD207Q9UJ71 328 aa9.94□□□□□ -0.82
CTNNA1-240ENST00000523912 GAS2O43903 313 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 FGF18O76093 207 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 EOMESO95936 686 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 LTBRP36941 435 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 RFC5P40937 340 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 NRIP1P48552 1158 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 MRE11P49959 708 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 POLGP54098 1239 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 FAM189BP81408 668 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 NHLH1Q02575 133 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 KRT17Q04695 432 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 CLUL1Q15846 466 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 FAM102BQ5T8I3 360 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 B3GNT9Q6UX72 402 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 OTUD6AQ7L8S5 288 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 RHPN2Q8IUC4 686 aa9.93□□□□□ -0.82
CTNNA1-240ENST00000523912 GTF3C6Q969F1 213 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms