RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DDAH1O94760 285 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 SCARF1Q14162 830 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 RASA3Q14644 834 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 BCL2A1Q16548 175 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 MPRIPQ6WCQ1 1025 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 MDM1Q8TC05 714 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 MIPOL1Q8TD10 442 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 PRCCQ92733 491 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 CNOT6LQ96LI5 555 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 METTL14Q9HCE5 456 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 CD2APQ9Y5K6 639 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 TAF1P21675 1872 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 NRXN2Q9P2S2 1712 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 DNAJC6O75061 913 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 TMEM67Q5HYA8 995 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 ANKRD40Q6AI12 368 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 KIF2BQ8N4N8 673 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 KIAA0895Q8NCT3 520 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 DENND1AQ8TEH3 1009 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 RSPH1Q8WYR4 309 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 RAPGEF4Q8WZA2 1011 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 RAB3IPQ96QF0 476 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 RBM38Q9H0Z9 239 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 DNAAF2Q9NVR5 837 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 TBCCD1Q9NVR7 557 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 ZNHIT2Q9UHR6 403 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 GGT7Q9UJ14 662 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 MMEP08473 750 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 XBP1P17861 261 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 HSPA2P54652 639 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 KCNC4Q03721 635 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 HYIQ5T013 277 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 IRF2BP2Q7Z5L9 587 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
CSMD1-213ENST00000523488 SAR1AQ9NR31 198 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 PCDHA2Q9Y5H9 948 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 SIP14410 1827 aa9.07□□□□□ -0.96
CSMD1-213ENST00000523488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 MTA2O94776 668 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 IFNAR2P48551 515 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TROAPQ12815 778 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 AUHQ13825 339 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TMEM154Q6P9G4 183 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 ANKRD13DQ6ZTN6 518 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 EXOC3L1Q86VI1 746 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 FANCBQ8NB91 859 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 CABLES1Q8TDN4 633 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 ART4Q93070 314 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 SPATA16Q9BXB7 569 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 INTS9Q9NV88 658 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 WDR37Q9Y2I8 494 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TRIM49BA6NDI0 452 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 PSMA7O14818 248 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 KCNA6P17658 529 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 SLC1A4P43007 532 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 MCAMP43121 646 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TIMM10P62072 90 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 KLC1Q07866 573 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 AKNAD1Q5T1N1 836 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 BORAQ6PGQ7 559 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 PIGOQ8TEQ8 1089 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 EEF2KMTQ96G04 330 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 MYD88Q99836 296 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 CTTNBP2NLQ9P2B4 639 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 GSG1L2A8MUP6 293 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 PALMO75781 387 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 NOVP48745 357 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 EMP3P54852 163 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 NFIL3Q16649 462 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 TTC38Q5R3I4 469 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 NT5DC3Q86UY8 548 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 LONP2Q86WA8 852 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 MAIP1Q8WWC4 291 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 NRG4Q8WWG1 115 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 PTCD3Q96EY7 689 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 FGD4Q96M96 766 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 SERPINB12Q96P63 405 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 CCDC85AQ96PX6 553 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 DHX36Q9H2U1 1008 aaKnown RBP9.06□□□□□ -0.96
CSMD1-213ENST00000523488 MMRN2Q9H8L6 949 aa9.06□□□□□ -0.96
CSMD1-213ENST00000523488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms