RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 NSUN7Q8NE18 718 aaKnown RBP9.29□□□□□ -0.92
CSMD1-206ENST00000520002 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
CSMD1-206ENST00000520002 NCLNQ969V3 563 aa9.29□□□□□ -0.92
CSMD1-206ENST00000520002 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
CSMD1-206ENST00000520002 RPS6KC1Q96S38 1066 aa9.29□□□□□ -0.92
CSMD1-206ENST00000520002 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TMC5Q6UXY8 1006 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 FAM149B1Q96BN6 582 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 SERPINB10P48595 397 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 ASZ1Q8WWH4 475 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 FAM210AQ96ND0 272 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 RNF103-CHMP3A0A140T963 221 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 IKBKBO14920 756 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TTLL1O95922 423 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 GAP43P17677 238 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 LSP1P33241 339 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 GPR101Q96P66 508 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 C6orf203Q9P0P8 240 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 FBXL5Q9UKA1 691 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TYW5A2RUC4 315 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 H0YC42 278 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 ESRRBO95718 433 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PMLP29590 882 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 KCTD21Q4G0X4 260 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 SLC17A8Q8NDX2 589 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 UBN2Q6ZU65 1347 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 LSM1O15116 133 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TMCC1O94876 653 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TRIM16O95361 564 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PSMC2P35998 433 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PAPOLAP51003 745 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 MAN2A1Q16706 1144 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PCIF1Q9H4Z3 704 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 GDF11O95390 407 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 SMAD1Q15797 465 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 UBN1Q9NPG3 1134 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 E2F6O75461 281 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 CNBD2Q96M20 576 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 KMT5AQ9NQR1 393 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 CSPG5O95196 566 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 IL17REQ8NFR9 667 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 KIF17Q9P2E2 1029 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TTC37Q6PGP7 1564 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 CDC25AP30304 524 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 CDC25CP30307 473 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 MDH1P40925 334 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 TFDP1Q14186 410 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 ASPRV1Q53RT3 343 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 ZMYM1Q5SVZ6 1142 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 AMNQ9BXJ7 453 aa9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
CSMD1-206ENST00000520002 PTPREP23469 700 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 SLC16A2P36021 539 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 TRAPPC10P48553 1259 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 KDSRQ06136 332 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 LRRC31Q6UY01 552 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 MARCH10Q8NA82 808 aaPredicted RBP9.27□□□□□ -0.92
CSMD1-206ENST00000520002 LCMT1Q9UIC8 334 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 XPAP23025 273 aaPredicted RBP9.27□□□□□ -0.92
CSMD1-206ENST00000520002 SLC7A3Q8WY07 619 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.92
CSMD1-206ENST00000520002 ATP1A1P05023 1023 aaKnown RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 CHN1P15882 459 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 LMBRD2Q68DH5 695 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 PCGF5Q86SE9 256 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 DEPDC1BQ8WUY9 529 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 CDC42BPBQ9Y5S2 1711 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 CD58P19256 250 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 ATP1A4Q13733 1029 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 EXT2Q93063 718 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 MYO18AQ92614 2054 aaKnown RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 ATXN3P54252 364 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 ACCSQ96QU6 501 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 PAPOLBQ9NRJ5 636 aaKnown RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 GINM1Q9NU53 330 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 INO80B-WBP1J3KQ70 363 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 KIF19Q2TAC6 998 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 INO80BQ9C086 356 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 KLC2Q9H0B6 622 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 OLA1Q9NTK5 396 aaKnown RBP9.27□□□□□ -0.93
CSMD1-206ENST00000520002 CROCC2H7BZ55 1655 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 RSPH10B2B2RC85 870 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 PI4K2BG5E9Z4 385 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 PPP6R2O75170 966 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 DDHD2O94830 711 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 RSPH10BP0C881 870 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 TRPM8Q7Z2W7 1104 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 TBCKQ8TEA7 893 aa9.27□□□□□ -0.93
CSMD1-206ENST00000520002 PDP2Q9P2J9 529 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms