RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 UNC13DQ70J99 1090 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 CABP7Q86V35 215 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 FAM114A1Q8IWE2 563 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 ZC3H3Q8IXZ2 948 aaKnown RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 CCDC170Q8IYT3 715 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 SLC44A5Q8NCS7 719 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 GALNT11Q8NCW6 608 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 OR8K1Q8NGG5 319 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 RASGRP4Q8TDF6 673 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 GOLGA1Q92805 767 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 RPGRQ92834 1020 aaKnown RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 P2RX5Q93086 422 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 CCDC47Q96A33 483 aaKnown RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 CEP95Q96GE4 821 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 MBOAT7Q96N66 472 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 C8orf37Q96NL8 207 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 NAP1L4Q99733 375 aaKnown RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 EDEM3Q9BZQ6 932 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 LRRC27Q9C0I9 530 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 GLT8D2Q9H1C3 349 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 EHD4Q9H223 541 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 HAUS4Q9H6D7 363 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 MTMR4Q9NYA4 1195 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 CALCOCO1Q9P1Z2 691 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 GDAQ9Y2T3 454 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 DAGLAQ9Y4D2 1042 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 RGPD3A6NKT7 1758 aaPredicted RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 RGPD4Q7Z3J3 1758 aa5.62□□□□□ -1.51
SDC2-204ENST00000519914 COL11A2P13942 1736 aaPredicted RBP5.62□□□□□ -1.51
SDC2-204ENST00000519914 TTC26A0AVF1 554 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 CTAGE9A4FU28 777 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 SMCO2A6NFE2 343 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 RASSF10A6NK89 507 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 EIF3CLB5ME19 914 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 POLRMTO00411 1230 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 MAP2K7O14733 419 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 NDUFA10O95299 355 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 LCA5LO95447 670 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 TBC1D8O95759 1140 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 GCFC2P16383 781 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 KRT9P35527 623 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 PMS1P54277 932 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 NAPAP54920 295 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 PIP4K2BP78356 416 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 ZBED6P86452 979 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 ATP11AP98196 1134 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 PSMD2Q13200 908 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 GRB10Q13322 594 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 PTPN21Q16825 1174 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 TXNRD1Q16881 649 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 HSP90AA4PQ58FG1 418 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 MIIPQ5JXC2 388 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 SOGA3Q5TF21 947 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 PAPD7Q5XG87 772 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 MCTP2Q6DN12 878 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 CC2D1AQ6P1N0 951 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 WDR59Q6PJI9 974 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 HHIPL2Q6UWX4 724 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 TRAPPC11Q7Z392 1133 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 ZNF572Q7Z3I7 529 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 HEATR3Q7Z4Q2 680 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 REXO1Q8N1G1 1221 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 GUF1Q8N442 669 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 TBCKQ8TEA7 893 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 RUBCNQ92622 972 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 MKL1Q969V6 931 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 SPACA7Q96KW9 195 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 UBL7Q96S82 380 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 DESI2Q9BSY9 194 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 RIC8AQ9NPQ8 531 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 BLOC1S4Q9NUP1 217 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 EXOC1Q9NV70 894 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 TAB2Q9NYJ8 693 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 STOML1Q9UBI4 398 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 POLLQ9UGP5 575 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 SEC63Q9UGP8 760 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.61□□□□□ -1.51
SDC2-204ENST00000519914 SYNPO2Q9UMS6 1093 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 RAXQ9Y2V3 346 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 REXO2Q9Y3B8 237 aaKnown RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 ATP6V0A2Q9Y487 856 aa5.61□□□□□ -1.51
SDC2-204ENST00000519914 EPN1Q9Y6I3 576 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 V9GYY5 206 aaPredicted RBP5.61□□□□□ -1.51
SDC2-204ENST00000519914 LOXHD1Q8IVV2 1947 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CYP3A7-CYP3A51PA0A087WV96 503 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 ANO9A1A5B4 782 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 PP2D1A8MPX8 630 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 CCNT1O60563 726 aaKnown RBP5.6□□□□□ -1.51
SDC2-204ENST00000519914 CLSTN1O94985 981 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 WISP1O95388 367 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 MED26O95402 600 aa5.6□□□□□ -1.51
SDC2-204ENST00000519914 FGFR1OPO95684 399 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms