RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ZP2Q05996 745 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 TBC1D8BQ0IIM8 1120 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 DRP2Q13474 957 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 NONOQ15233 471 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSMD1-205ENST00000519623 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
CSMD1-205ENST00000519623 CLUL1Q15846 466 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 INF2Q27J81 1249 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 XKR3Q5GH77 459 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 TMEM31Q5JXX7 168 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 LRRC55Q6ZSA7 311 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 KRT25Q7Z3Z0 450 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 MSLNLQ96KJ4 702 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 CASD1Q96PB1 797 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 PRKAG3Q9UGI9 489 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 FAM50BQ9Y247 325 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 PCDHB12Q9Y5F1 795 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 PCDHGC5Q9Y5F6 944 aa14.01□□□□□ -0.17
CSMD1-205ENST00000519623 EML1O00423 815 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 SLC37A4O43826 429 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 CSDE1O75534 798 aaKnown RBP14□□□□□ -0.17
CSMD1-205ENST00000519623 FGF18O76093 207 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 CTDNEP1O95476 244 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 ERVFC1P60507 584 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 UBE3AQ05086 875 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 SPOUT1Q5T280 376 aaKnown RBP14□□□□□ -0.17
CSMD1-205ENST00000519623 ECHDC2Q86YB7 292 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 EFHBQ8N7U6 833 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 COLGALT1Q8NBJ5 622 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 SH2D3AQ9BRG2 576 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 TMEM117Q9H0C3 514 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 SLKQ9H2G2 1235 aaPredicted RBP14□□□□□ -0.17
CSMD1-205ENST00000519623 AAASQ9NRG9 546 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 GJB4Q9NTQ9 266 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 CLEC1BQ9P126 229 aa14□□□□□ -0.17
CSMD1-205ENST00000519623 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
CSMD1-205ENST00000519623 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 A0A0U1RQF3 1178 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 FAM86C2PA6NEL3 165 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 CDKL5O76039 1030 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 EYA4O95677 639 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
CSMD1-205ENST00000519623 FGFR4P22455 802 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 NRIP1P48552 1158 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 CDC42EP1Q00587 391 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 LETM2Q2VYF4 491 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 PPP4R3AQ6IN85 833 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 ANO5Q75V66 913 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 RBM23Q86U06 439 aaKnown RBP13.99□□□□□ -0.17
CSMD1-205ENST00000519623 ZNF598Q86UK7 904 aaKnown RBP13.99□□□□□ -0.17
CSMD1-205ENST00000519623 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 PPP2R3CQ969Q6 453 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 KCNMB3Q9NPA1 279 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 SEPT9Q9UHD8 586 aaPredicted RBP13.99□□□□□ -0.17
CSMD1-205ENST00000519623 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
CSMD1-205ENST00000519623 STK36Q9NRP7 1315 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 FSCN2O14926 492 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 MAFO75444 373 aaPredicted RBP13.98□□□□□ -0.17
CSMD1-205ENST00000519623 GLP2RO95838 553 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 ALADP13716 330 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 ANAPC15P60006 121 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 PSMC5P62195 406 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 PPP2R5CQ13362 524 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 SMAD4Q13485 552 aaKnown RBP13.98□□□□□ -0.17
CSMD1-205ENST00000519623 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 EARS2Q5JPH6 523 aaKnown RBP13.98□□□□□ -0.17
CSMD1-205ENST00000519623 CLLU1OSQ5K130 101 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 NEK8Q86SG6 692 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 MICAL1Q8TDZ2 1067 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 HAS1Q92839 578 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 FAM20AQ96MK3 541 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 GCOM2Q9BZD3 368 aaPredicted RBP13.98□□□□□ -0.17
CSMD1-205ENST00000519623 TLE6Q9H808 572 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 TLR9Q9NR96 1032 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 VAV3Q9UKW4 847 aa13.98□□□□□ -0.17
CSMD1-205ENST00000519623 A0A087WZ62 844 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 PER2O15055 1255 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 HOXA2O43364 376 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 EOMESO95936 686 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 NEFLP07196 543 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 FDPSP14324 419 aaKnown RBP13.97□□□□□ -0.17
CSMD1-205ENST00000519623 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-205ENST00000519623 LAG3P18627 525 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 NDUFV1P49821 464 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 DNM2P50570 870 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 AK2P54819 239 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 PLCB3Q01970 1234 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 COASYQ13057 564 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 KCNT2Q6UVM3 1135 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 THNSL1Q8IYQ7 743 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
CSMD1-205ENST00000519623 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-205ENST00000519623 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 SUCLA2Q9P2R7 463 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms