RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ANO3Q9BYT9 981 aa14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 LIMD1Q9UGP4 676 aa14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 MAFBQ9Y5Q3 323 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 RBM8AQ9Y5S9 174 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 IRAK3Q9Y616 596 aa14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 SLC12A7Q9Y666 1083 aa14.03□□□□□ -0.16
TRAPPC9-204ENST00000518723 MYO10Q9HD67 2058 aa14.02□□□□□ -0.16
TRAPPC9-204ENST00000518723 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 MAGEB2O15479 319 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 EOMESO95936 686 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 AP3B2Q13367 1082 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 RARS2Q5T160 578 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZNF598Q86UK7 904 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 METTL13Q8N6R0 699 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 LINC01465Q8N7H1 131 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 RSPH1Q8WYR4 309 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 MRPL9Q9BYD2 267 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 ADAMTS10Q9H324 1103 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 DBR1Q9UK59 544 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.17
TRAPPC9-204ENST00000518723 DMXL1Q9Y485 3027 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CNTNAP5Q8WYK1 1306 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CARNS1A5YM72 827 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 IPO5O00410 1097 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CXCL14O95715 111 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 WEE2P0C1S8 567 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 AOC1P19801 751 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 EIF4BP23588 611 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 ALDH7A1P49419 539 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CLK2P49760 499 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 ADCY7P51828 1080 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 POLGP54098 1239 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 NAPAP54920 295 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 NLRP11P59045 1033 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 GIT2Q14161 759 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 SGMS1Q86VZ5 419 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CCDC105Q8IYK2 499 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 C12orf76Q8N812 135 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 TMEM169Q96HH4 297 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZBP1Q9H171 429 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 GLT8D2Q9H1C3 349 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 CYP26B1Q9NR63 512 aa14.01□□□□□ -0.17
TRAPPC9-204ENST00000518723 IGLV3-22A0A075B6J6 115 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 FAM86B1E9PN63 330 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 hCG_1984214I3L0E3 225 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 FAM86B2P0C5J1 330 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 CTSAP10619 480 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 NPR3P17342 541 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 TMOD1P28289 359 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZNF76P36508 570 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 CLCN3P51790 818 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 BCAR1P56945 870 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-204ENST00000518723 PLA2G4DQ86XP0 818 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 SMAP1Q8IYB5 467 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-204ENST00000518723 VPS52Q8N1B4 723 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZNF713Q8N859 430 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-204ENST00000518723 FLCNQ8NFG4 579 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 SLC22A17Q8WUG5 538 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 CRYGNQ8WXF5 182 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 ACSF2Q96CM8 615 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-204ENST00000518723 MAP7D2Q96T17 732 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 RTP3Q9BQQ7 232 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 TBC1D22BQ9NU19 505 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 AKT3Q9Y243 479 aa14□□□□□ -0.17
TRAPPC9-204ENST00000518723 DNAH14Q0VDD8 3507 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 EVPLQ92817 2033 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 CYP3A4P08684 503 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 DARSP14868 501 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 EPCAMP16422 314 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 METAP2P50579 478 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 FUT2Q10981 343 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 TDGQ13569 410 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 EFCAB12Q6NXP0 572 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 DDX53Q86TM3 631 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 MICU3Q86XE3 530 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 RNF169Q8NCN4 708 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 HELQQ8TDG4 1101 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 FAM167AQ96KS9 214 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 BARHL2Q9NY43 387 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 DACT1Q9NYF0 836 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 DUSP12Q9UNI6 340 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 FRYLO94915 3013 aa13.99□□□□□ -0.17
TRAPPC9-204ENST00000518723 NCOR2Q9Y618 2525 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 NT5C1B-RDH14C9J2C7 533 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 PI15O43692 258 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 PSAPP07602 524 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 CA8P35219 290 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 GPC3P51654 580 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 SETQ01105 290 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 ANGPT1Q15389 498 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms