RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 WDSUB1Q8N9V3 476 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MAPK1IP1LQ8NDC0 245 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FAM13CQ8NE31 585 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF398Q8TD17 642 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RABGGTAQ92696 567 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NKD1Q969G9 470 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GAL3ST3Q96A11 431 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF479Q96JC4 524 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SNX27Q96L92 541 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF512Q96ME7 567 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CAMK1GQ96NX5 476 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF347Q96SE7 839 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 UHRF1Q96T88 793 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CTRCQ99895 268 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 QTRT1Q9BXR0 403 aaKnown RBP-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 OR10A2Q9H208 303 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 C12orf49Q9H741 205 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF556Q9HAH1 456 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CPNE5Q9HCH3 593 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TRNAU1APQ9NX07 287 aaKnown RBP-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PRR13Q9NZ81 148 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NCKIPSDQ9NZQ3 722 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SFMBT1Q9UHJ3 866 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 KCNG2Q9UJ96 466 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZFP69BQ9UJL9 534 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ADAMTS5Q9UNA0 930 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CYP8B1Q9UNU6 501 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF652Q9Y2D9 606 aa-0.22□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TRIP12Q14669 1992 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SCN5AQ14524 2016 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CYP2D7A0A087X1C5 515 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZBTB7CA1YPR0 619 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 UNC119BA6NIH7 251 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 KCNU1A8MYU2 1149 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 H3BNX3 289 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MEIS1O00470 390 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PPP1R11O60927 126 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MFAP3LO75121 409 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZMYND10O75800 440 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 NCR1O76036 304 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ABLIM3O94929 683 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SPDEFO95238 335 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 NDUFA10O95299 355 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 HMGCRP04035 888 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 TUBB4AP04350 444 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ITGAMP11215 1152 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 DDX6P26196 483 aaKnown RBP eCLIP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CDK8P49336 464 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CRIP2P52943 208 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CHMP4BP1P59074 171 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 IRX6P78412 446 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PTPN11Q06124 597 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PDE4DQ08499 809 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SAFB2Q14151 953 aaKnown RBP eCLIP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CAPRIN1Q14444 709 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 KRT72Q14CN4 511 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 C14orf177Q52M58 125 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SEZ6Q53EL9 994 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PHF19Q5T6S3 580 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZNF618Q5T7W0 954 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 RASIP1Q5U651 963 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 E4F1Q66K89 784 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ARMC6Q6NXE6 501 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZNF549Q6P9A3 640 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 NHLRC1Q6VVB1 395 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 DTHD1Q6ZMT9 781 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 RSRC2Q7L4I2 434 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 KRTAP13-1Q8IUC0 172 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PLXDC1Q8IUK5 500 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 STPG3Q8N7X2 389 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MB21D1Q8N884 522 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CPEB3Q8NE35 698 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 OR14K1Q8NGZ2 314 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 B4GALNT2Q8NHY0 566 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 NKD2Q969F2 451 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CCDC74BQ96LY2 380 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 WDR24Q96S15 920 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ADAM2Q99965 735 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 RTBDNQ9BSG5 229 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SPRR2GQ9BYE4 73 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZDHHC5Q9C0B5 715 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 GSTO2Q9H4Y5 243 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MANSC1Q9H8J5 431 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PRM3Q9NNZ6 103 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 NPHS2Q9NP85 383 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 CD93Q9NPY3 652 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 RTN4Q9NQC3 1192 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 ZNF275Q9NSD4 429 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 DLGAP2Q9P1A6 1054 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 GULP1Q9UBP9 304 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 PCDHB1Q9Y5F3 818 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SQORQ9Y6N5 450 aa-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 KMT2BQ9UMN6 2715 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1238P-201ENST00000517215 SPRR5A0A1B0GTR4 108 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 C2orf71A6NGG8 1288 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MARCH11A6NNE9 402 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 UPK3BL1B0FP48 263 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 UPK3BL2E5RIL1 263 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 E5RJQ4 531 aa-0.24□□□□□ -2.45
RNU6-1238P-201ENST00000517215 MYO1FO00160 1098 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms