RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 EFHBQ8N7U6 833 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 RPGRQ92834 1020 aaKnown RBP4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 TMEM176AQ96HP8 235 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 ADOQ96SZ5 270 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 ORAI3Q9BRQ5 295 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 POLR3BQ9NW08 1133 aaPredicted RBP4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 DNAI1Q9UI46 699 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 MYRFQ9Y2G1 1151 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 TSC22D4Q9Y3Q8 395 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 TBX22Q9Y458 520 aa4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
SNORA40.12-201ENST00000516329 LCHNA4D1U4 455 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 ENPP3O14638 875 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 MATN3O15232 486 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 PRPF6O94906 941 aaKnown RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 COMTP21964 271 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 MSX2P35548 267 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 KPNA1P52294 538 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 IL2P60568 153 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 ATP2C1P98194 919 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 ADCY1Q08828 1119 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 DUSP8Q13202 625 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 R3HDM1Q15032 1099 aaKnown RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 TIGD7Q6NT04 549 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 UNQ6494/PRO21346Q6UXR6 183 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 KIAA0907Q7Z7F0 614 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 NOP9Q86U38 636 aaKnown RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 KIF18BQ86Y91 864 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 PHYKPLQ8IUZ5 450 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 GPR135Q8IZ08 494 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 SHCBP1Q8NEM2 672 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 OR2W6PQ8NHA6 318 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 LEO1Q8WVC0 666 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 DYDC2Q96IM9 177 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 CDK5RAP1Q96SZ6 601 aaKnown RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 MS4A5Q9H3V2 200 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 MTG2Q9H4K7 406 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 KCMF1Q9P0J7 381 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 CTDP1Q9Y5B0 961 aaPredicted RBP4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 SLC30A1Q9Y6M5 507 aa4.64□□□□□ -1.67
SNORA40.12-201ENST00000516329 C1QTNF3-AMACRE9PGA6 284 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SLC26A4O43511 780 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 TGM5O43548 720 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 PDE8AO60658 829 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 H2AFYO75367 372 aaKnown RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 MYCLP1P12525 358 aaPredicted RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 HNRNPLP14866 589 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 TNFRSF1AP19438 455 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 ACO1P21399 889 aaKnown RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 CD40P25942 277 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 RPS19P39019 145 aaKnown RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SCNN1BP51168 640 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 BCAR1P56945 870 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SMAD3P84022 425 aaKnown RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 RIN1Q13671 783 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SAFB2Q14151 953 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 KIAA1841Q6NSI8 718 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 POLNQ7Z5Q5 900 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 PASD1Q8IV76 773 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 ZZZ3Q8IYH5 903 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 AHI1Q8N157 1196 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SMC1BQ8NDV3 1235 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 GCDHQ92947 438 aaPredicted RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SLC7A6OSQ96CW6 309 aaPredicted RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 RPL10LQ96L21 214 aaKnown RBP4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 WDR92Q96MX6 357 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SEMA4AQ9H3S1 761 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 SPTLC3Q9NUV7 552 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 VWA7Q9Y334 891 aa4.63□□□□□ -1.67
SNORA40.12-201ENST00000516329 GSG1L2A8MUP6 293 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 ELL2O00472 640 aaPredicted RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 PCDH8O95206 1070 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 ADCYAP1R1P41586 468 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 SESN2P58004 480 aaPredicted RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 BPIFB4P59827 614 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 FOXL1Q12952 345 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 TCIRG1Q13488 830 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 GRM7Q14831 915 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 PRKD1Q15139 912 aaPredicted RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 GIMAP6Q6P9H5 292 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 KANSL1Q7Z3B3 1105 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 BMP8AQ7Z5Y6 402 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 ZNF808Q8N4W9 903 aaPredicted RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 ANKRD53Q8N9V6 530 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 NKD2Q969F2 451 aaPredicted RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 GFM2Q969S9 779 aaKnown RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 FERMT2Q96AC1 680 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 AGO3Q9H9G7 860 aaKnown RBP4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 PLA2G3Q9NZ20 509 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 MSRAQ9UJ68 235 aa4.62□□□□□ -1.67
SNORA40.12-201ENST00000516329 A0A087X0B3 334 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 ST20-MTHFSA0A0A6YYL1 179 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 C2orf78A6NCI8 922 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 GOLGA8BA8MQT2 603 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 OPHN1O60890 802 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 FKBP9O95302 570 aa4.61□□□□□ -1.67
SNORA40.12-201ENST00000516329 LSSP48449 732 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms