RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 FAM111BQ6SJ93 734 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RIOX2Q8IUF8 465 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TMEM192Q8IY95 271 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF485Q8NCK3 441 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MDGA1Q8NFP4 955 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ACTRT2Q8TDY3 377 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 STK32AQ8WU08 396 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 GTF3C2Q8WUA4 911 aaPredicted RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DPF3Q92784 378 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 VCPIP1Q96JH7 1222 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DCTN5Q9BTE1 182 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CPNE5Q9HCH3 593 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ADAMTS1Q9UHI8 967 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 EIF2B4Q9UI10 523 aaKnown RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZMIZ1Q9ULJ6 1067 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 STAB2Q8WWQ8 2551 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF462Q96JM2 2506 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HYDINQ4G0P3 5121 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NPHP3-ACAD11A0A0J9YXS1 232 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 A0A1B0GU03 582 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LACTBL1A8MY62 500 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HGSO14964 777 aaPredicted RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 IPO13O94829 963 aaKnown RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FAM13AO94988 1023 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SPDEFO95238 335 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HTR3BO95264 441 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FDXRP22570 491 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MPGP29372 298 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LMOD1P29536 600 aaPredicted RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 BMPR1AP36894 532 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CDKN2AP42771 156 aaKnown RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 COMPP49747 757 aaPredicted RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MRPS35P82673 323 aaKnown RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MAP3K12Q12852 859 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ARSHQ5FYA8 562 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MROH9Q5TGP6 573 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MBLAC2Q68D91 279 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SLC18B1Q6NT16 456 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF66Q6ZN08 573 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 Q6ZNX1 250 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CPEB3Q8NE35 698 aaKnown RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RABGGTAQ92696 567 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ADAM2Q99965 735 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 QTRT1Q9BXR0 403 aaKnown RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PPP1R12CQ9BZL4 782 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MIR1-1HGQ9H1L0 117 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TRPM5Q9NZQ8 1165 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LRIT1Q9P2V4 623 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FAM184BQ9ULE4 1060 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HIVEP2P31629 2446 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ABCA2Q9BZC7 2435 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ANKRD11Q6UB99 2663 aaPredicted RBP0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
SCARNA21.1-201ENST00000515996 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TRANK1O15050 2925 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PRR36Q9H6K5 1346 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 GAGE12BA1L429 117 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 GAGE12HA6NDE8 117 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 STXBP3O00186 592 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LATS1O95835 1130 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PLA2G2AP14555 144 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HK1P19367 917 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DDX6P26196 483 aaKnown RBP eCLIP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ADCY8P40145 1251 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LIG3P49916 1009 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MEOX1P50221 254 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CSRP3P50461 194 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RPS26P62854 115 aaKnown RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RBM10P98175 930 aaKnown RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PFKPQ01813 784 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TFF2Q03403 129 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SLC1A5Q15758 541 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DCAF17Q5H9S7 520 aaPredicted RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CAPRIN2Q6IMN6 1127 aaKnown RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 AMIGO2Q86SJ2 522 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RTKN2Q8IZC4 609 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ANKRD24Q8TF21 1146 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 BRF1Q92994 677 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF512Q96ME7 567 aaPredicted RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 Q96MF0 132 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TIMP4Q99727 224 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HEPHQ9BQS7 1158 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SH2D3AQ9BRG2 576 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MCMBPQ9BTE3 642 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NCOA5Q9HCD5 579 aaKnown RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ICAM5Q9UMF0 924 aa0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RYR3Q15413 4870 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ABCA12Q86UK0 2595 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HERC1Q15751 4861 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HMCN2Q8NDA2 5059 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF839A8K0R7 811 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 AURKAO14965 403 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MFAP3LO75121 409 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PAMP19021 973 aa0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 APOBEC3AP31941 199 aaPredicted RBP0.16□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SEPHS1P49903 392 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms