RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 BRAPQ7Z569 592 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 ZNF410Q86VK4 478 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 PIGOQ8TEQ8 1089 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 TCP11Q8WWU5 503 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 LINC01599Q8WXQ3 324 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 NACC1Q96RE7 527 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 LRWD1Q9UFC0 647 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 SIP14410 1827 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 DENND3A2RUS2 1198 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
LMNA-225ENST00000515824 MED24O75448 989 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 STAG3L1P0CL83 205 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 DARSP14868 501 aaKnown RBP21.62■■□□□ 1.05
LMNA-225ENST00000515824 MUTP22033 750 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 PRPHP41219 470 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 EMC2Q15006 297 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 HSCBQ8IWL3 235 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 PSPC1Q8WXF1 523 aaKnown RBP21.62■■□□□ 1.05
LMNA-225ENST00000515824 TMEM143Q96AN5 459 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 MTRQ99707 1265 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 ADAM2Q99965 735 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 INO80BQ9C086 356 aaPredicted RBP21.62■■□□□ 1.05
LMNA-225ENST00000515824 CERS4Q9HA82 394 aa21.62■■□□□ 1.05
LMNA-225ENST00000515824 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
LMNA-225ENST00000515824 A0A087WZ62 844 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 LINC01553A4QN01 128 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 ASAP2O43150 1006 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 DGAT1O75907 488 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 ARHGEF15O94989 841 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 ZSCAN20P17040 1043 aaPredicted RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 RARRES1P49788 294 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 NPAS4Q8IUM7 802 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 SP7Q8TDD2 431 aaPredicted RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 PRPF31Q8WWY3 499 aaKnown RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 ARNTL2Q8WYA1 636 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 NLRP4Q96MN2 994 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 TGS1Q96RS0 853 aaKnown RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 FDXACB1Q9BRP7 624 aaPredicted RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 RGS18Q9NS28 235 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 C1orf112Q9NSG2 853 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 BMP2KQ9NSY1 1161 aaPredicted RBP21.61■■□□□ 1.05
LMNA-225ENST00000515824 FOXD4L1Q9NU39 408 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 COL4A3BPQ9Y5P4 624 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 PTPRSQ13332 1948 aa21.61■■□□□ 1.05
LMNA-225ENST00000515824 A0A087WWV3 80 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 CCT6AP40227 531 aaKnown RBP21.6■■□□□ 1.05
LMNA-225ENST00000515824 ATP2C1P98194 919 aaPredicted RBP21.6■■□□□ 1.05
LMNA-225ENST00000515824 SLC24A5Q71RS6 500 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 KSR1Q8IVT5 923 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 IGSF22Q8N9C0 903 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 LRFN2Q9ULH4 789 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 PCDHB7Q9Y5E2 793 aa21.6■■□□□ 1.05
LMNA-225ENST00000515824 MGEA5O60502 916 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 SRGAP2CP0DJJ0 459 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 SYT1P21579 422 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 SARSP49591 514 aaKnown RBP21.59■■□□□ 1.05
LMNA-225ENST00000515824 KRT79Q5XKE5 535 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 FERMT3Q86UX7 667 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 ATP6V0A4Q9HBG4 840 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 DBR1Q9UK59 544 aaKnown RBP21.59■■□□□ 1.05
LMNA-225ENST00000515824 LOXHD1Q8IVV2 1947 aa21.59■■□□□ 1.05
LMNA-225ENST00000515824 IBSPP21815 317 aaPredicted RBP21.58■■□□□ 1.05
LMNA-225ENST00000515824 IGFBP4P22692 258 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 SFPQP23246 707 aaKnown RBP eCLIP21.58■■□□□ 1.05
LMNA-225ENST00000515824 ERVK-21P61565 698 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 LAMTOR4Q0VGL1 99 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 MXD4Q14582 209 aaPredicted RBP21.58■■□□□ 1.05
LMNA-225ENST00000515824 IL17AQ16552 155 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 ARL6IP4Q66PJ3 421 aaKnown RBP21.58■■□□□ 1.05
LMNA-225ENST00000515824 POTEGQ6S5H5 508 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 CRIPAKQ8N1N5 446 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 SNX29Q8TEQ0 813 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 SAMD11Q96NU1 681 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 XPNPEP1Q9NQW7 623 aa21.58■■□□□ 1.05
LMNA-225ENST00000515824 MYO9BQ13459 2157 aa21.58■■□□□ 1.04
LMNA-225ENST00000515824 CHD9Q3L8U1 2897 aa21.58■■□□□ 1.04
LMNA-225ENST00000515824 C9IYK1 514 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 CSDE1O75534 798 aaKnown RBP21.57■■□□□ 1.04
LMNA-225ENST00000515824 DGKIO75912 1065 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 BMP15O95972 392 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 HSP90AA1P07900 732 aaKnown RBP21.57■■□□□ 1.04
LMNA-225ENST00000515824 FGFR4P22455 802 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 DSC3Q14574 896 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 FIBCD1Q8N539 461 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 MAFAQ8NHW3 353 aaPredicted RBP21.57■■□□□ 1.04
LMNA-225ENST00000515824 ZNF689Q96CS4 500 aaPredicted RBP21.57■■□□□ 1.04
LMNA-225ENST00000515824 CHST12Q9NRB3 414 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 MTUS1Q9ULD2 1270 aa21.57■■□□□ 1.04
LMNA-225ENST00000515824 TTC3P53804 2025 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 RFXAPO00287 272 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 USO1O60763 962 aaKnown RBP21.56■■□□□ 1.04
LMNA-225ENST00000515824 FAM189BP81408 668 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 TFDP1Q14186 410 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 BTG3Q14201 252 aaPredicted RBP21.56■■□□□ 1.04
LMNA-225ENST00000515824 ADGRE1Q14246 886 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 SRGAP1Q7Z6B7 1085 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 RNF149Q8NC42 400 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 IFT122Q9HBG6 1241 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 DACT1Q9NYF0 836 aa21.56■■□□□ 1.04
LMNA-225ENST00000515824 KIAA1024Q9UPX6 916 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms