RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 CC2D1AQ6P1N0 951 aaPredicted RBP4.72□□□□□ -1.65
HERC4-215ENST00000515753 ZNF627Q7L945 461 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 CXXC5Q7LFL8 322 aaKnown RBP4.72□□□□□ -1.65
HERC4-215ENST00000515753 LDLRAD3Q86YD5 345 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 NIM1KQ8IY84 436 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 C2orf69Q8N8R5 385 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 MFSD3Q96ES6 412 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 AMNQ9BXJ7 453 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 SLC2A4RGQ9NR83 387 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 B4GALT6Q9UBX8 382 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 FAM184BQ9ULE4 1060 aa4.72□□□□□ -1.65
HERC4-215ENST00000515753 REXO2Q9Y3B8 237 aaKnown RBP4.72□□□□□ -1.65
HERC4-215ENST00000515753 TLDC2A0PJX2 215 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 TRAF5O00463 557 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 ADH4P08319 380 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 MEOX1P50221 254 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 STAT5BP51692 787 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 DALRD3Q5D0E6 543 aaKnown RBP4.71□□□□□ -1.66
HERC4-215ENST00000515753 CREB3L3Q68CJ9 461 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 TRIM68Q6AZZ1 485 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 UBE2R2Q712K3 238 aaPredicted RBP4.71□□□□□ -1.66
HERC4-215ENST00000515753 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 RTKN2Q8IZC4 609 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 PPM1KQ8N3J5 372 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 D2HGDHQ8N465 521 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 ZNF483Q8TF39 744 aaPredicted RBP4.71□□□□□ -1.66
HERC4-215ENST00000515753 ASB15Q8WXK1 588 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 CLIP3Q96DZ5 547 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 WNK4Q96J92 1243 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 OR10A2Q9H208 303 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 AGO3Q9H9G7 860 aaKnown RBP4.71□□□□□ -1.66
HERC4-215ENST00000515753 CABP5Q9NP86 173 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 FBXO10Q9UK96 956 aa4.71□□□□□ -1.66
HERC4-215ENST00000515753 TMA7Q9Y2S6 64 aaKnown RBP4.71□□□□□ -1.66
HERC4-215ENST00000515753 A0A0G2JNJ9 132 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 RASSF10A6NK89 507 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 CAPN14A8MX76 684 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 SCDO00767 359 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 FOXP2O15409 715 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 MMEP08473 750 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 JMJD7P0C870 316 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 ECE1P42892 770 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 HHEXQ03014 270 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 MOGSQ13724 837 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 ACAP1Q15027 740 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 TAF7LQ5H9L4 462 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 CATSPEREQ5SY80 951 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 PIK3R6Q5UE93 754 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 SPTY2D1Q68D10 685 aaPredicted RBP4.7□□□□□ -1.66
HERC4-215ENST00000515753 CDCA2Q69YH5 1023 aaPredicted RBP4.7□□□□□ -1.66
HERC4-215ENST00000515753 LRRTM3Q86VH5 581 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 WDR48Q8TAF3 677 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 BTBD2Q9BX70 525 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 ACSS2Q9NR19 701 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 CEP72Q9P209 647 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 Q9UFV3 132 aa4.7□□□□□ -1.66
HERC4-215ENST00000515753 HMGB1P09429 215 aaKnown RBP4.69□□□□□ -1.66
HERC4-215ENST00000515753 MAKP20794 623 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 HSD3B2P26439 372 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 STAT3P40763 770 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 DSG1Q02413 1049 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 HGFACQ04756 655 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 KANK2Q63ZY3 851 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 GIMAP6Q6P9H5 292 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 RTN4RL1Q86UN2 441 aaPredicted RBP4.69□□□□□ -1.66
HERC4-215ENST00000515753 DNAJC10Q8IXB1 793 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 SHCBP1Q8NEM2 672 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 ZG16BQ96DA0 208 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 AGAP2Q99490 1192 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 FOXB1Q99853 325 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 GIT1Q9Y2X7 761 aa4.69□□□□□ -1.66
HERC4-215ENST00000515753 PTPDC1A2A3K4 754 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 GSG1L2A8MUP6 293 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 GOLGA6L22H0YM25 854 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 H7C1D1 291 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 DVL2O14641 736 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 SLC26A4O43511 780 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 F2P00734 622 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 CYP17A1P05093 508 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 PURAQ00577 322 aaKnown RBP4.68□□□□□ -1.66
HERC4-215ENST00000515753 CRHR2Q13324 411 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 RRP1BQ14684 758 aaKnown RBP4.68□□□□□ -1.66
HERC4-215ENST00000515753 EPHA7Q15375 998 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 CFAP100Q494V2 611 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 TMEM200BQ69YZ2 307 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 SDE2Q6IQ49 451 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 AHI1Q8N157 1196 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 E2F7Q96AV8 911 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 FOXRED1Q96CU9 486 aaPredicted RBP4.68□□□□□ -1.66
HERC4-215ENST00000515753 OR10A5Q9H207 317 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 TMX1Q9H3N1 280 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 NELFAQ9H3P2 528 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 ZNF703Q9H7S9 590 aaPredicted RBP4.68□□□□□ -1.66
HERC4-215ENST00000515753 MAPRE3Q9UPY8 281 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 DMRT1Q9Y5R6 373 aa4.68□□□□□ -1.66
HERC4-215ENST00000515753 PRAMEF22A3QJZ6 481 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 ALDH6A1Q02252 535 aaKnown RBP4.67□□□□□ -1.66
HERC4-215ENST00000515753 ADAM15Q13444 863 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms