RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DYMQ7RTS9 669 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 RPAINQ86UA6 219 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 KIAA0319LQ8IZA0 1049 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 DAW1Q8N136 415 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 PSPC1Q8WXF1 523 aaKnown RBP23.26■■□□□ 1.31
LSM6-207ENST00000515311 NUP62CLQ9H1M0 184 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 C17orf75Q9HAS0 396 aa23.26■■□□□ 1.31
LSM6-207ENST00000515311 CCDC85CA6NKD9 419 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 TLR3O15455 904 aaKnown RBP23.25■■□□□ 1.31
LSM6-207ENST00000515311 TBCAO75347 108 aaKnown RBP23.25■■□□□ 1.31
LSM6-207ENST00000515311 ARL2P36404 184 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 CLCN3P51790 818 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 ZNF131P52739 623 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 RAD51AP2Q09MP3 1159 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 DPYDQ12882 1025 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 DRP2Q13474 957 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 TRIM60Q495X7 471 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 ZNF710Q8N1W2 664 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 TMEM143Q96AN5 459 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 MAP7D2Q96T17 732 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 POLR3FQ9H1D9 316 aaPredicted RBP23.25■■□□□ 1.31
LSM6-207ENST00000515311 BLZF1Q9H2G9 400 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 GPRC5CQ9NQ84 441 aa23.25■■□□□ 1.31
LSM6-207ENST00000515311 SUCLA2Q9P2R7 463 aaPredicted RBP23.25■■□□□ 1.31
LSM6-207ENST00000515311 FRMD3A2A2Y4 597 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 DCDC2CA8MYV0 355 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 PQBP1O60828 265 aaKnown RBP23.24■■□□□ 1.31
LSM6-207ENST00000515311 PRR29P0C7W0 189 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 SOX10P56693 466 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 ASIC1P78348 528 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 PNOCQ13519 176 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 MXD4Q14582 209 aaPredicted RBP23.24■■□□□ 1.31
LSM6-207ENST00000515311 LRRC26Q2I0M4 334 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 MAEAQ7L5Y9 396 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 RSPH3Q86UC2 560 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 NME8Q8N427 588 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 PRPF31Q8WWY3 499 aaKnown RBP23.24■■□□□ 1.31
LSM6-207ENST00000515311 COL4A3BPQ9Y5P4 624 aa23.24■■□□□ 1.31
LSM6-207ENST00000515311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.23■■□□□ 1.31
LSM6-207ENST00000515311 PVALEFA0A1B0GWK0 134 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 RSPH10B2B2RC85 870 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 ASAP2O43150 1006 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 CAND2O75155 1236 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 FAM13AO94988 1023 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 RSPH10BP0C881 870 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 GAP43P17677 238 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 CASP1P29466 404 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 CDC42EP1Q00587 391 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 TLE2Q04725 743 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 CCDC65Q8IXS2 484 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 DNAJB3Q8WWF6 145 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 FAM49AQ9H0Q0 323 aaPredicted RBP23.23■■□□□ 1.31
LSM6-207ENST00000515311 PARVGQ9HBI0 331 aa23.23■■□□□ 1.31
LSM6-207ENST00000515311 ALPK3Q96L96 1907 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 SMC2O95347 1197 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 PLS3P13797 630 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 CACNB1Q02641 598 aaPredicted RBP23.22■■□□□ 1.31
LSM6-207ENST00000515311 RBL2Q08999 1139 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 LAMTOR4Q0VGL1 99 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 PPP2R5AQ15172 486 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 CAMK4Q16566 473 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 UNC13DQ70J99 1090 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 SPATA20Q8TB22 786 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 DHX38Q92620 1227 aaKnown RBP23.22■■□□□ 1.31
LSM6-207ENST00000515311 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
LSM6-207ENST00000515311 PANK4Q9NVE7 773 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 LARSQ9P2J5 1176 aaKnown RBP23.22■■□□□ 1.31
LSM6-207ENST00000515311 SEL1LQ9UBV2 794 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 KCNG1Q9UIX4 513 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 AKT3Q9Y243 479 aa23.22■■□□□ 1.31
LSM6-207ENST00000515311 TRAK2O60296 914 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 RPN1P04843 607 aaKnown RBP23.21■■□□□ 1.31
LSM6-207ENST00000515311 IDEP14735 1019 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 GLRA2P23416 452 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 TRIM71Q2Q1W2 868 aaKnown RBP23.21■■□□□ 1.31
LSM6-207ENST00000515311 CCDC183Q5T5S1 534 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 RHPN2Q8IUC4 686 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 CCDC155Q8N6L0 562 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 ASAP3Q8TDY4 903 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 WNT8BQ93098 351 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 IFT74Q96LB3 600 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 ATP11BQ9Y2G3 1177 aa23.21■■□□□ 1.31
LSM6-207ENST00000515311 KLRC4O43908 158 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 VTNP04004 478 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 NAMPTP43490 491 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 POU5F1BQ06416 359 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 EHHADHQ08426 723 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 DMP1Q13316 513 aaPredicted RBP23.2■■□□□ 1.3
LSM6-207ENST00000515311 TFDP1Q14186 410 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 NT5DC1Q5TFE4 455 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 CAGE1Q8TC20 777 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 SPIRE2Q8WWL2 714 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 SMARCE1Q969G3 411 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 CCDC47Q96A33 483 aaKnown RBP23.2■■□□□ 1.3
LSM6-207ENST00000515311 GSDMAQ96QA5 445 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 NTPCRQ9BSD7 190 aaKnown RBP23.2■■□□□ 1.3
LSM6-207ENST00000515311 ZHX3Q9H4I2 956 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 POLD4Q9HCU8 107 aa23.2■■□□□ 1.3
LSM6-207ENST00000515311 OLFML3Q9NRN5 406 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms