RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 IDEP14735 1019 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 ARL2P36404 184 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 EHHADHQ08426 723 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 KMT5BQ4FZB7 885 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 FAM102BQ5T8I3 360 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 CCDC65Q8IXS2 484 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 LINC01465Q8N7H1 131 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 SEZ6LQ9BYH1 1024 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 COL4A3BPQ9Y5P4 624 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 DNAH12Q6ZR08 3092 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 A0A0U1RQG5 324 aaPredicted RBP13.88□□□□□ -0.19
PDPN-210ENST00000513143 TREHO43280 583 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 TBCAO75347 108 aaKnown RBP13.88□□□□□ -0.19
PDPN-210ENST00000513143 FAM13AO94988 1023 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 GAP43P17677 238 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 SOX10P56693 466 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 RTP1P59025 263 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 COASYQ13057 564 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 IER5Q5VY09 327 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 GDF6Q6KF10 455 aaPredicted RBP13.88□□□□□ -0.19
PDPN-210ENST00000513143 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
PDPN-210ENST00000513143 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 ZBTB10Q96DT7 871 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 SUGCTQ9HAC7 445 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 C17orf75Q9HAS0 396 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 PARVGQ9HBI0 331 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
PDPN-210ENST00000513143 SMIM35A0A1B0GVV1 85 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 SFI1A8K8P3 1242 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 ARVCFO00192 962 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 COL6A1P12109 1028 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 PLS3P13797 630 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 TMOD1P28289 359 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 DNM2P50570 870 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
PDPN-210ENST00000513143 DRP2Q13474 957 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 HERC4Q5GLZ8 1057 aaPredicted RBP13.87□□□□□ -0.19
PDPN-210ENST00000513143 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 LRRC71Q8N4P6 559 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 MYCT1Q8N699 235 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 TRIML1Q8N9V2 468 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 POLR3FQ9H1D9 316 aaPredicted RBP13.87□□□□□ -0.19
PDPN-210ENST00000513143 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 LARSQ9P2J5 1176 aaKnown RBP13.87□□□□□ -0.19
PDPN-210ENST00000513143 SEL1LQ9UBV2 794 aa13.87□□□□□ -0.19
PDPN-210ENST00000513143 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
PDPN-210ENST00000513143 SYCE3A1L190 88 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 BIN1O00499 593 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 CYP2C9P11712 490 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 BMP6P22004 513 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 GLRA2P23416 452 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 CDK7P50613 346 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 CLCN3P51790 818 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 PSMD2Q13200 908 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 MORC3Q14149 939 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 MXD4Q14582 209 aaPredicted RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 SFR1Q86XK3 245 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 KIAA0319LQ8IZA0 1049 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 ASAP3Q8TDY4 903 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 PSPC1Q8WXF1 523 aaKnown RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 CTAGE1Q96RT6 745 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 NTPCRQ9BSD7 190 aaKnown RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 SENP6Q9GZR1 1112 aaPredicted RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 GZF1Q9H116 711 aaPredicted RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
PDPN-210ENST00000513143 SUCLA2Q9P2R7 463 aaPredicted RBP13.86□□□□□ -0.19
PDPN-210ENST00000513143 ASAP2O43150 1006 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 MAPTP10636 758 aaKnown RBP13.85□□□□□ -0.19
PDPN-210ENST00000513143 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
PDPN-210ENST00000513143 PEX3P56589 373 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 NLRP12P59046 1061 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 DMP1Q13316 513 aaPredicted RBP13.85□□□□□ -0.19
PDPN-210ENST00000513143 PPP2R5AQ15172 486 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 PTGISQ16647 500 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 FAM26FQ5R3K3 315 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
PDPN-210ENST00000513143 ISM2Q6H9L7 571 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 TAF2Q6P1X5 1199 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
PDPN-210ENST00000513143 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
PDPN-210ENST00000513143 SPIRE2Q8WWL2 714 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms