RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 CCDC174Q6PII3 467 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 LDHDQ86WU2 507 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 C12orf56Q8IXR9 622 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 OLIG1Q8TAK6 271 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 KRT12Q99456 494 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 PSMD1Q99460 953 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 VPS33BQ9H267 617 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 WRAP73Q9P2S5 460 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 AJAP1Q9UKB5 411 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 DIS3Q9Y2L1 958 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 RPTORQ8N122 1335 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 P4HA2O15460 535 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 CHMP2AO43633 222 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 TMEM253P0C7T8 217 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 CAP2P40123 477 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 SKOR1P84550 965 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 MAPK7Q13164 816 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 CUL1Q13616 776 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 HES6Q96HZ4 224 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 RUFY1Q96T51 708 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 HINFPQ9BQA5 517 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 LXNQ9BS40 222 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 MAP3K20Q9NYL2 800 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF219Q9P2Y4 722 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 APEX2Q9UBZ4 518 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 DBR1Q9UK59 544 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 NFU1Q9UMS0 254 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 RBBP6Q7Z6E9 1792 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 NCANO14594 1321 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 PGRMC1O00264 195 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ZBTB39O15060 712 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 MAPK13O15264 365 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 PMM2O15305 246 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 LYPLA2O95372 231 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ICAM1P05362 532 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 P4HBP07237 508 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 MRPS25P82663 173 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 NT5DC3Q86UY8 548 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 METTL13Q8N6R0 699 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ST6GALNAC4Q9H4F1 302 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 TAF1DQ9H5J8 278 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 TMEM206Q9H813 350 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 RAD51CO43502 376 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ASNSP08243 561 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ITGB5P18084 799 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 HSPA9P38646 679 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 GALCP54803 685 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 BFSP1Q12934 665 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 KIF22Q14807 665 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 TCEAL1Q15170 157 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 CLUL1Q15846 466 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 INTS8Q75QN2 995 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 MCF2L2Q86YR7 1114 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 DAW1Q8N136 415 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 LMO3Q8TAP4 145 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 LNX1Q8TBB1 728 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 U2AF1L4Q8WU68 220 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 RFFLQ8WZ73 363 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 ZIM3Q96PE6 472 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 TIPINQ9BVW5 301 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 GPR88Q9GZN0 384 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 INTS2Q9H0H0 1204 aaKnown RBP10.05□□□□□ -0.8
CPNE4-210ENST00000512332 SLITRK6Q9H5Y7 841 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 USP20Q9Y2K6 914 aa10.05□□□□□ -0.8
CPNE4-210ENST00000512332 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-210ENST00000512332 RGPD4Q7Z3J3 1758 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CLRN2A0PK11 232 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 DHX15O43143 795 aaKnown RBP10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CEP104O60308 925 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 EXOC3O60645 756 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 HIP1RO75146 1068 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 IRAK1P51617 712 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
CPNE4-210ENST00000512332 PPATQ06203 517 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 COG2Q14746 738 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 TNIP1Q15025 636 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 PPP2R5EQ16537 467 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CBWD6Q4V339 395 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CBWD3Q5JTY5 395 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CBWD5Q5RIA9 395 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms