RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TBC1D9BQ66K14 1250 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 LINC01356Q8N9X3 169 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 HNRNPLLQ8WVV9 542 aaKnown RBP7.44□□□□□ -1.22
GYPB-212ENST00000511198 ALG3Q92685 438 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 PEX11GQ96HA9 241 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 GDF15Q99988 308 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 ZCCHC4Q9H5U6 513 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 LRP2BPQ9P2M1 347 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 CDH23Q9H251 3354 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 MRC1P22897 1456 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 FFAR3O14843 346 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 PMLP29590 882 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 ZEB1P37275 1124 aaPredicted RBP7.43□□□□□ -1.22
GYPB-212ENST00000511198 SLC9A5Q14940 896 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
GYPB-212ENST00000511198 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 KRT26Q7Z3Y9 468 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 CD99L2Q8TCZ2 262 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 PSMD1Q99460 953 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 MARCH2Q9P0N8 246 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
GYPB-212ENST00000511198 KLF4O43474 513 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 SNRPB2P08579 225 aaKnown RBP7.42□□□□□ -1.22
GYPB-212ENST00000511198 ECI1P42126 302 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 GFRA1P56159 465 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 CXCL9Q07325 125 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 TESK1Q15569 626 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 PRSS53Q2L4Q9 553 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 SLC10A6Q3KNW5 377 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 VWA3BQ502W6 1294 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 DENND5AQ6IQ26 1287 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 ANKS3Q6ZW76 656 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 TEX2Q8IWB9 1127 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
GYPB-212ENST00000511198 FNIP1Q8TF40 1166 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 CCDC140Q96MF4 163 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 ST7Q9NRC1 585 aa7.42□□□□□ -1.22
GYPB-212ENST00000511198 BAHCC1Q9P281 2608 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 A0A0G2JLL6 359 aaPredicted RBP7.41□□□□□ -1.22
GYPB-212ENST00000511198 CPP00450 1065 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 GRIA2P42262 883 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 MRE11P49959 708 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 FAM109BQ6ICB4 259 aaPredicted RBP7.41□□□□□ -1.22
GYPB-212ENST00000511198 MOB2Q70IA6 237 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 DNAJC10Q8IXB1 793 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 Q8N1Y9 231 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 CPA5Q8WXQ8 436 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 C1orf159Q96HA4 380 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 HTATIP2Q9BUP3 242 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 EPN3Q9H201 632 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
GYPB-212ENST00000511198 COL15A1P39059 1388 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 NPC1L1Q9UHC9 1359 aa7.41□□□□□ -1.22
GYPB-212ENST00000511198 NCOR1O75376 2440 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 C22orf46C9J442 243 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 CYP19A1P11511 503 aaPredicted RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 NPR1P16066 1061 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 RBM10P98175 930 aaKnown RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 DLX2Q07687 328 aaPredicted RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 RRS1Q15050 365 aaKnown RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 DDR2Q16832 855 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 SLC9C1Q4G0N8 1177 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 HSP90AB2PQ58FF8 381 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 ACBD5Q5T8D3 534 aaPredicted RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 NLRP10Q86W26 655 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 DIO2Q92813 273 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 CDX2Q99626 313 aaPredicted RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 CNOT7Q9UIV1 285 aaKnown RBP7.4□□□□□ -1.22
GYPB-212ENST00000511198 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 EVC2Q86UK5 1308 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 ZNF609O15014 1411 aa7.4□□□□□ -1.22
GYPB-212ENST00000511198 KDM3BQ7LBC6 1761 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 KLRG2A4D1S0 409 aaPredicted RBP7.39□□□□□ -1.23
GYPB-212ENST00000511198 OTOL1A6NHN0 477 aaPredicted RBP7.39□□□□□ -1.23
GYPB-212ENST00000511198 UBE2Q2LH0YL09 131 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 MEFVO15553 781 aaPredicted RBP7.39□□□□□ -1.23
GYPB-212ENST00000511198 SGSM2O43147 1006 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 FPR2P25090 351 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 CTSWP56202 376 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
GYPB-212ENST00000511198 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 SLC35F1Q5T1Q4 408 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 TMEM145Q8NBT3 493 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 SYT8Q8NBV8 401 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 RCBTB1Q8NDN9 531 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 ERO1AQ96HE7 468 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 LRFN3Q9BTN0 628 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
GYPB-212ENST00000511198 ZBTB1Q9Y2K1 713 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms