RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-207ENST00000511092 HIVEP1P15822 2718 aa7.42□□□□□ -1.22
CLCN3-207ENST00000511092 MED13LQ71F56 2210 aa7.42□□□□□ -1.22
CLCN3-207ENST00000511092 FOCADQ5VW36 1801 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 F5H6K3 240 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 ANP32CO43423 234 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 ASNSP08243 561 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 MMP3P08254 477 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 SELPP16109 830 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 FGFR2P21802 821 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 SIM2Q14190 667 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-207ENST00000511092 SLCO4C1Q6ZQN7 724 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 NOL8Q76FK4 1167 aaKnown RBP7.41□□□□□ -1.22
CLCN3-207ENST00000511092 FAM133AQ8N9E0 248 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 DEFB124Q8NES8 71 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 KLHDC4Q8TBB5 520 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 AFAP1L1Q8TED9 768 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 EDARADDQ8WWZ3 215 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 FGD4Q96M96 766 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 FEZ1Q99689 392 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 SEZ6LQ9BYH1 1024 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 USP44Q9H0E7 712 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 ARRDC1-AS1Q9H2J1 176 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 IL17BQ9UHF5 180 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 PRR12Q9ULL5 1215 aa7.41□□□□□ -1.22
CLCN3-207ENST00000511092 GNEQ9Y223 722 aaKnown RBP7.41□□□□□ -1.22
CLCN3-207ENST00000511092 DDX49Q9Y6V7 483 aaKnown RBP7.41□□□□□ -1.22
CLCN3-207ENST00000511092 LCTP09848 1927 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 LOXHD1Q8IVV2 1947 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 EML5Q05BV3 1969 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 SVILO95425 2214 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 SPAARA0A1B0GVQ0 90 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 C4orf47A7E2U8 309 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 B8ZZF3 427 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 DYNC1LI2O43237 492 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 EOMESO95936 686 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 IFIT1P09914 478 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 ARAFP10398 606 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 SRFP11831 508 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 LAMC2Q13753 1193 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 PUM3Q15397 648 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 STAG2Q8N3U4 1231 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 CELF5Q8N6W0 485 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 LSM14AQ8ND56 463 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 WDR66Q8TBY9 1149 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 ACER1Q8TDN7 264 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 TOP1MTQ969P6 601 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 ARID3AQ99856 593 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 IFIH1Q9BYX4 1025 aaKnown RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 OSBPL7Q9BZF2 842 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 PRORYQ9H606 182 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 PTPRCP08575 1304 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 FRMPD2Q68DX3 1309 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-207ENST00000511092 ADGRA3Q8IWK6 1321 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 CNTNAP5Q8WYK1 1306 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 ZMYM2Q9UBW7 1377 aa7.4□□□□□ -1.22
CLCN3-207ENST00000511092 CRYBG3Q68DQ2 2970 aa7.4□□□□□ -1.23
CLCN3-207ENST00000511092 CABIN1Q9Y6J0 2220 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 NUP205Q92621 2012 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 FNDC1Q4ZHG4 1894 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 EYA2O00167 538 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 CAPN9O14815 690 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 FOXD2O60548 495 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 AMPD1P23109 780 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 ITPKBP27987 946 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 RFX5P48382 616 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 FGD1P98174 961 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 TNFAIP2Q03169 654 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 SUZ12Q15022 739 aaKnown RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 MAMDC4Q6UXC1 1216 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 NFXL1Q6ZNB6 911 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 FAM9BQ8IZU0 186 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 DBF4BQ8NFT6 615 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 LPIN2Q92539 896 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 WNT8BQ93098 351 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 ATG4CQ96DT6 458 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 BCO2Q9BYV7 579 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 RC3H2Q9HBD1 1191 aaKnown RBP7.39□□□□□ -1.23
CLCN3-207ENST00000511092 HCN2Q9UL51 889 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 CELSR2Q9HCU4 2923 aa7.39□□□□□ -1.23
CLCN3-207ENST00000511092 ZNF806P0C7X5 589 aa7.38□□□□□ -1.23
CLCN3-207ENST00000511092 CKBP12277 381 aa7.38□□□□□ -1.23
CLCN3-207ENST00000511092 CEACAM1P13688 526 aa7.38□□□□□ -1.23
CLCN3-207ENST00000511092 CR2P20023 1033 aa7.38□□□□□ -1.23
CLCN3-207ENST00000511092 ELAVL4P26378 380 aaKnown RBP7.38□□□□□ -1.23
CLCN3-207ENST00000511092 ZEB1P37275 1124 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-207ENST00000511092 PURAQ00577 322 aaKnown RBP7.38□□□□□ -1.23
CLCN3-207ENST00000511092 TMEM132BQ14DG7 1078 aa7.38□□□□□ -1.23
CLCN3-207ENST00000511092 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms