RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ATXN1P54253 815 aaKnown RBP10.7□□□□□ -0.7
NEDD9-211ENST00000508546 ITGB3BPQ13352 177 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-211ENST00000508546 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 KIAA1841Q6NSI8 718 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 ABHD15Q6UXT9 468 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
NEDD9-211ENST00000508546 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 AGO4Q9HCK5 861 aaKnown RBP10.7□□□□□ -0.7
NEDD9-211ENST00000508546 ASPMQ8IZT6 3477 aa10.7□□□□□ -0.7
NEDD9-211ENST00000508546 DOCK8Q8NF50 2099 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 SPEGQ15772 3267 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 MEIS1O00470 390 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
NEDD9-211ENST00000508546 GPR32O75388 356 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 CCNE2O96020 404 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 FOSP01100 380 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-211ENST00000508546 CALM1P0DP23 149 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 CALM2P0DP24 149 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 CALM3P0DP25 149 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 BMS1Q14692 1282 aaKnown RBP10.69□□□□□ -0.7
NEDD9-211ENST00000508546 KIZQ2M2Z5 673 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 KIAA0319Q5VV43 1072 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 SLC39A11Q8N1S5 342 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 OSMRQ99650 979 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 DZANK1Q9NVP4 752 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 LIMD1Q9UGP4 676 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 FRYQ5TBA9 3013 aa10.69□□□□□ -0.7
NEDD9-211ENST00000508546 BACH1O14867 736 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 C22orf31O95567 290 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 EOMESO95936 686 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 IGHDP01880 384 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 ZSCAN20P17040 1043 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 PBX3P40426 434 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 ATAT1Q5SQI0 421 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 RARS2Q5T160 578 aaKnown RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 NIPA1Q7RTP0 329 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 ECHDC2Q86YB7 292 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 RIN2Q8WYP3 895 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 TMEM87BQ96K49 555 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 CYP26B1Q9NR63 512 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 IRAK3Q9Y616 596 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 MTCL1Q9Y4B5 1905 aaKnown RBP10.68□□□□□ -0.7
NEDD9-211ENST00000508546 CACNA1IQ9P0X4 2223 aa10.68□□□□□ -0.7
NEDD9-211ENST00000508546 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 DCDC2BA2VCK2 349 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CARNS1A5YM72 827 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CCDC69A6NI79 296 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CXCL14O95715 111 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 VTNP04004 478 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 ATP4AP20648 1035 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CHMLP26374 656 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 SREBF1P36956 1147 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 LIFRP42702 1097 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 GIT2Q14161 759 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CLLU1OSQ5K130 101 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 MIS18BP1Q6P0N0 1132 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 HEATR3Q7Z4Q2 680 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 BBXQ8WY36 941 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-211ENST00000508546 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CHAMP1Q96JM3 812 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 PPP1R16BQ96T49 567 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 RTP3Q9BQQ7 232 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 MRPL9Q9BYD2 267 aaKnown RBP10.67□□□□□ -0.7
NEDD9-211ENST00000508546 ANO3Q9BYT9 981 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 RIC8AQ9NPQ8 531 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 DBR1Q9UK59 544 aaKnown RBP10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
NEDD9-211ENST00000508546 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-211ENST00000508546 CEP295Q9C0D2 2601 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 A0A0U1RQF3 1178 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 MAGEB2O15479 319 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 DHX15O43143 795 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SGSM2O43147 1006 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 PRC1O43663 620 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 WEE2P0C1S8 567 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 CTSAP10619 480 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 GSPT1P15170 499 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 RXRAP19793 462 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 EIF4BP23588 611 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 MCM5P33992 734 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ALDH7A1P49419 539 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 POLGP54098 1239 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 NLRP11P59045 1033 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 TDGQ13569 410 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 TTC22Q5TAA0 569 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SWSAP1Q6NVH7 229 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms