RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LRRC8DQ7L1W4 858 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 KIAA0319LQ8IZA0 1049 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
HTT-204ENST00000508321 PLIN2Q99541 437 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 RUSC1Q9BVN2 902 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 XPNPEP1Q9NQW7 623 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 AKT3Q9Y243 479 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 TRPV2Q9Y5S1 764 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 SQORQ9Y6N5 450 aa11.37□□□□□ -0.59
HTT-204ENST00000508321 H0YCG3 227 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 KINO60870 393 aaKnown RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 MBD3O95983 291 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 KRT18P05783 430 aaKnown RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 PFKMP08237 780 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 CKBP12277 381 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 GAP43P17677 238 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 THPOP40225 353 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 CLCN3P51790 818 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 ZNF131P52739 623 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 DMP1Q13316 513 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 MCM6Q14566 821 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 ODR4Q5SWX8 454 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 FMR1NBQ8N0W7 255 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 LRRC71Q8N4P6 559 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 NFKBIZQ9BYH8 718 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 FAM49AQ9H0Q0 323 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 POLR3FQ9H1D9 316 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 C2orf40Q9H1Z8 148 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 LARSQ9P2J5 1176 aaKnown RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 SUCLA2Q9P2R7 463 aaPredicted RBP11.36□□□□□ -0.59
HTT-204ENST00000508321 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
HTT-204ENST00000508321 HIP1RO75146 1068 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 PRPF40AO75400 957 aaKnown RBP11.35□□□□□ -0.59
HTT-204ENST00000508321 ZNF202O95125 648 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 TIMP1P01033 207 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 RAG1P15918 1043 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 ARL2P36404 184 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 NAMPTP43490 491 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 PHKA2P46019 1235 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 GPC3P51654 580 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 CRYBB1P53674 252 aaPredicted RBP11.35□□□□□ -0.59
HTT-204ENST00000508321 MGAT3Q09327 533 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
HTT-204ENST00000508321 CNNM3Q8NE01 707 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 PPP1R13LQ8WUF5 828 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 DPF3Q92784 378 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 KCNN1Q92952 543 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 SCLT1Q96NL6 688 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 CELF4Q9BZC1 486 aaKnown RBP11.35□□□□□ -0.59
HTT-204ENST00000508321 TRIM9Q9C026 710 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
HTT-204ENST00000508321 PARVGQ9HBI0 331 aa11.35□□□□□ -0.59
HTT-204ENST00000508321 FRMD3A2A2Y4 597 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 RSPH10B2B2RC85 870 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 FAM13AO94988 1023 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 RSPH10BP0C881 870 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 PLS3P13797 630 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
HTT-204ENST00000508321 EFNA5P52803 228 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 MAPK7Q13164 816 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 ALCAMQ13740 583 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 ZNF618Q5T7W0 954 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 CDCA2Q69YH5 1023 aaPredicted RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 RHPN2Q8IUC4 686 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 ZBTB8OSQ8IWT0 167 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 CCDC65Q8IXS2 484 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 PRPF31Q8WWY3 499 aaKnown RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 DDX12PQ92771 950 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 APBB2Q92870 758 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 WNT8BQ93098 351 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 CCDC47Q96A33 483 aaKnown RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 TMEM143Q96AN5 459 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms