RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 C7orf61Q8IZ16 206 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 LARSQ9P2J5 1176 aaKnown RBP22.25■■□□□ 1.15
USP53-203ENST00000507597 SERTAD1Q9UHV2 236 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 PHLPP2Q6ZVD8 1323 aa22.25■■□□□ 1.15
USP53-203ENST00000507597 RSPH10B2B2RC85 870 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 H0YCG3 227 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 FAM13AO94988 1023 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 RSPH10BP0C881 870 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 CKBP12277 381 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 SELPP16109 830 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 SCP2P22307 547 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 ABCD1P33897 745 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 SMTNP53814 917 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 MRPS6P82932 125 aaKnown RBP22.24■■□□□ 1.15
USP53-203ENST00000507597 POU5F1BQ06416 359 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 RUFY4Q6ZNE9 571 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 MAEAQ7L5Y9 396 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 RHPN2Q8IUC4 686 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 LINC01465Q8N7H1 131 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 USP38Q8NB14 1042 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 SLC17A8Q8NDX2 589 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 TMEM143Q96AN5 459 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 POLR3FQ9H1D9 316 aaPredicted RBP22.24■■□□□ 1.15
USP53-203ENST00000507597 TBX21Q9UL17 535 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 COL4A3BPQ9Y5P4 624 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 TRPV2Q9Y5S1 764 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 SQORQ9Y6N5 450 aa22.24■■□□□ 1.15
USP53-203ENST00000507597 GADD45BO75293 160 aaPredicted RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 TIMP1P01033 207 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 RFC2P35250 354 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 LONRF3Q496Y0 759 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 KRBA2Q6ZNG9 492 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 CCDC65Q8IXS2 484 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 ELOA2Q8IYF1 753 aaPredicted RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 FMR1NBQ8N0W7 255 aaPredicted RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 TMEM199Q8N511 208 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 PRPF31Q8WWY3 499 aaKnown RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 NLRP7Q8WX94 980 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 DDX12PQ92771 950 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 NOC4LQ9BVI4 516 aaKnown RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 RUSC1Q9BVN2 902 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 CELF4Q9BZC1 486 aaKnown RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 GCOM2Q9BZD3 368 aaPredicted RBP22.23■■□□□ 1.15
USP53-203ENST00000507597 GOLPH3LQ9H4A5 285 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 XPNPEP1Q9NQW7 623 aa22.23■■□□□ 1.15
USP53-203ENST00000507597 HIP1RO75146 1068 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 MBD3O95983 291 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 ARL2P36404 184 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 CRYBB1P53674 252 aaPredicted RBP22.22■■□□□ 1.15
USP53-203ENST00000507597 NLRP11P59045 1033 aaKnown RBP22.22■■□□□ 1.15
USP53-203ENST00000507597 DMP1Q13316 513 aaPredicted RBP22.22■■□□□ 1.15
USP53-203ENST00000507597 FAM26DQ5JW98 314 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 LRRC8DQ7L1W4 858 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 ZBTB8OSQ8IWT0 167 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 C7orf25Q9BPX7 421 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 LBHD1Q9BQE6 289 aaPredicted RBP22.22■■□□□ 1.15
USP53-203ENST00000507597 C2orf40Q9H1Z8 148 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 PARVGQ9HBI0 331 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 LMBRD1Q9NUN5 540 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 SEL1LQ9UBV2 794 aa22.22■■□□□ 1.15
USP53-203ENST00000507597 ACTN4O43707 911 aaKnown RBP22.21■■□□□ 1.15
USP53-203ENST00000507597 VTNP04004 478 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 GAP43P17677 238 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 MCM4P33991 863 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 NAMPTP43490 491 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 AFMP43652 599 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 PHKA2P46019 1235 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 NCBP1Q09161 790 aaKnown RBP22.21■■□□□ 1.15
USP53-203ENST00000507597 LAMTOR4Q0VGL1 99 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 PCBP1Q15365 356 aaKnown RBP eCLIP22.21■■□□□ 1.15
USP53-203ENST00000507597 TRIM71Q2Q1W2 868 aaKnown RBP22.21■■□□□ 1.15
USP53-203ENST00000507597 CNNM4Q6P4Q7 775 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 RPUSD2Q8IZ73 545 aaKnown RBP22.21■■□□□ 1.15
USP53-203ENST00000507597 ENGASEQ8NFI3 743 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 DHX38Q92620 1227 aaKnown RBP22.21■■□□□ 1.15
USP53-203ENST00000507597 PAGE5Q96GU1 130 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 CTAGE1Q96RT6 745 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 ZHX3Q9H4I2 956 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 CDY2AQ9Y6F7 541 aa22.21■■□□□ 1.15
USP53-203ENST00000507597 MYMKA6NI61 221 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 PLS3P13797 630 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 IDEP14735 1019 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 GPC3P51654 580 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 ASIC1P78348 528 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 SNW1Q13573 536 aaKnown RBP22.2■■□□□ 1.14
USP53-203ENST00000507597 GIT2Q14161 759 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 ARSHQ5FYA8 562 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 ZNF618Q5T7W0 954 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 MFSD5Q6N075 450 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 DYMQ7RTS9 669 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 RNF149Q8NC42 400 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 DEPTORQ8TB45 409 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 ZBTB10Q96DT7 871 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 NLRP4Q96MN2 994 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 REEP2Q9BRK0 252 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 PPP1R12CQ9BZL4 782 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 TRIM9Q9C026 710 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 GINS2Q9Y248 185 aa22.2■■□□□ 1.14
USP53-203ENST00000507597 PVALEFA0A1B0GWK0 134 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 GTPBP6O43824 516 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms