RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 SLC12A3P55017 1021 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CCL23P55773 120 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 DRP2Q13474 957 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 KARSQ15046 597 aaKnown RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 RESP18Q5W5W9 173 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CCDC73Q6ZRK6 1079 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 C16orf59Q7L2K0 433 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 LRRC71Q8N4P6 559 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 LRRC15Q8TF66 581 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 SCLYQ96I15 445 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CHAMP1Q96JM3 812 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 SUCLA2Q9P2R7 463 aaPredicted RBP10.82□□□□□ -0.68
SFXN1-205ENST00000506963 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
SFXN1-205ENST00000506963 A0A087WWV3 80 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 PLA2G4BP0C869 781 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 EPHB4P54760 987 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
SFXN1-205ENST00000506963 LPIN1Q14693 890 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 E2F4Q16254 413 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 RINT1Q6NUQ1 792 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 PRPF31Q8WWY3 499 aaKnown RBP10.81□□□□□ -0.68
SFXN1-205ENST00000506963 LARP4BQ92615 738 aaKnown RBP10.81□□□□□ -0.68
SFXN1-205ENST00000506963 RAD54LQ92698 747 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 PYM1Q9BRP8 204 aaKnown RBP10.81□□□□□ -0.68
SFXN1-205ENST00000506963 NFKBIZQ9BYH8 718 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 CUEDC2Q9H467 287 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 C17orf75Q9HAS0 396 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 AKT3Q9Y243 479 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
SFXN1-205ENST00000506963 TRIOBPQ9H2D6 2365 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 A0A087X0B3 334 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 USO1O60763 962 aaKnown RBP10.8□□□□□ -0.68
SFXN1-205ENST00000506963 BAIAP3O94812 1187 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 VTNP04004 478 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 CTSHP09668 335 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 DARSP14868 501 aaKnown RBP10.8□□□□□ -0.68
SFXN1-205ENST00000506963 EIF4BP23588 611 aaKnown RBP10.8□□□□□ -0.68
SFXN1-205ENST00000506963 NLRP11P59045 1033 aaKnown RBP10.8□□□□□ -0.68
SFXN1-205ENST00000506963 LAMTOR4Q0VGL1 99 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 MAPK7Q13164 816 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 PCBP1Q15365 356 aaKnown RBP eCLIP10.8□□□□□ -0.68
SFXN1-205ENST00000506963 TMEM240Q5SV17 173 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 RRAGBQ5VZM2 374 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 CNKSR3Q6P9H4 555 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 TSHZ1Q6ZSZ6 1077 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 TMEM87AQ8NBN3 555 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 TMEM40Q8WWA1 233 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 APBB2Q92870 758 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 KCNN1Q92952 543 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 TMEM143Q96AN5 459 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 RUSC1Q9BVN2 902 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
SFXN1-205ENST00000506963 MICAL3Q7RTP6 2002 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ABHD14A-ACY1A0A1B0GW23 586 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 EFCAB14O75071 495 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 FGBP02675 491 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 GLRA2P23416 452 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 STAT6P42226 847 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 NAMPTP43490 491 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ZNF131P52739 623 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 PTENP60484 403 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 TMEM62Q0P6H9 643 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 TFDP1Q14186 410 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 PPP2R5AQ15172 486 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ZRSR1Q15695 479 aaKnown RBP10.79□□□□□ -0.68
SFXN1-205ENST00000506963 KIZQ2M2Z5 673 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 CNNM4Q6P4Q7 775 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ZNF365Q70YC5 407 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 DAW1Q8N136 415 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 IQUBQ8NA54 791 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 RASSF8Q8NHQ8 419 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 SEPT8Q92599 483 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 DRC1Q96MC2 740 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 PLIN2Q99541 437 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.79□□□□□ -0.681e-6■□□□□ 8.8
SFXN1-205ENST00000506963 GCOM2Q9BZD3 368 aaPredicted RBP10.79□□□□□ -0.68
SFXN1-205ENST00000506963 OSBPL7Q9BZF2 842 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
SFXN1-205ENST00000506963 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms