RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CDK17Q00537 523 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 NFATC3Q12968 1075 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 STILQ15468 1287 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 EFCAB2Q5VUJ9 269 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 KANK2Q63ZY3 851 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 TMEFF1Q8IYR6 380 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 CPA6Q8N4T0 437 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 JADE3Q92613 823 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 RAX2Q96IS3 184 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 SIGLEC10Q96LC7 697 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 WRNIP1Q96S55 665 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 RHOBTB2Q9BYZ6 727 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 FTSJ1Q9UET6 329 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 DENND2AQ9ULE3 1009 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 GPR45Q9Y5Y3 372 aa7.82□□□□□ -1.16
HERC4-213ENST00000506515 OPHN1O60890 802 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 MTHFD2P13995 350 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 MTNR1BP49286 362 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 CCT2P78371 535 aaKnown RBP7.81□□□□□ -1.16
HERC4-213ENST00000506515 KRT85P78386 507 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 MRPS9P82933 396 aaKnown RBP7.81□□□□□ -1.16
HERC4-213ENST00000506515 PPARAQ07869 468 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 HSP90AB2PQ58FF8 381 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 OTOP2Q7RTS6 562 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 KCNK18Q7Z418 384 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 LYSMD2Q8IV50 215 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 AUTS2Q8WXX7 1259 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 TEKT5Q96M29 485 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 NOL10Q9BSC4 688 aaKnown RBP7.81□□□□□ -1.16
HERC4-213ENST00000506515 PRSS50Q9UI38 385 aa7.81□□□□□ -1.16
HERC4-213ENST00000506515 MAFGO15525 162 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 CYP7B1O75881 506 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 PF4V1P10720 104 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 AGXTP21549 392 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 MLLT6P55198 1093 aaPredicted RBP7.8□□□□□ -1.16
HERC4-213ENST00000506515 HTRA3P83110 453 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 SSPNQ14714 243 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 MCTP1Q6DN14 999 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 TRMT10BQ6PF06 316 aaKnown RBP7.8□□□□□ -1.16
HERC4-213ENST00000506515 NOL8Q76FK4 1167 aaKnown RBP7.8□□□□□ -1.16
HERC4-213ENST00000506515 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 PPM1NQ8N819 430 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 OR14C36Q8NHC7 312 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 GAB3Q8WWW8 586 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 PITHD1Q9GZP4 211 aaPredicted RBP7.8□□□□□ -1.16
HERC4-213ENST00000506515 KCMF1Q9P0J7 381 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 PCDHB6Q9Y5E3 794 aa7.8□□□□□ -1.16
HERC4-213ENST00000506515 H0Y858 1186 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 IL33O95760 270 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 CELA3BP08861 270 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 PI3P19957 117 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 GLDCP23378 1020 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 MESP2Q0VG99 397 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 SPIDRQ14159 915 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 MUM1Q2TAK8 710 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 GRAMD4Q6IC98 578 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 CNKSR3Q6P9H4 555 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 CXXC5Q7LFL8 322 aaKnown RBP7.79□□□□□ -1.16
HERC4-213ENST00000506515 MYO1HQ8N1T3 1032 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 CDYL2Q8N8U2 506 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 FNIP1Q8TF40 1166 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 PWWP2AQ96N64 755 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 KRTAP4-8Q9BYQ9 185 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 CDC42EP3Q9UKI2 254 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 ANKRD6Q9Y2G4 727 aa7.79□□□□□ -1.16
HERC4-213ENST00000506515 A0A0A6YYJ9 748 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 KNG1P01042 644 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 IL13P35225 146 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 SLC5A3P53794 718 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 ANTXR2P58335 489 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 DGKDQ16760 1214 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 ATG14Q6ZNE5 492 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 SLC41A1Q8IVJ1 513 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 TPH2Q8IWU9 490 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 CMTR2Q8IYT2 770 aaKnown RBP7.78□□□□□ -1.16
HERC4-213ENST00000506515 TSPEARQ8WU66 669 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 HSPBAP1Q96EW2 488 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 HIST1H2AHQ96KK5 128 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 CAMKK2Q96RR4 588 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 HIST1H2AJQ99878 128 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 TCF7L1Q9HCS4 588 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 EPB41L4AQ9HCS5 686 aaPredicted RBP7.78□□□□□ -1.16
HERC4-213ENST00000506515 ZNF277Q9NRM2 450 aaPredicted RBP7.78□□□□□ -1.16
HERC4-213ENST00000506515 SPATA6Q9NWH7 488 aaPredicted RBP7.78□□□□□ -1.16
HERC4-213ENST00000506515 CNOT6Q9ULM6 557 aaKnown RBP7.78□□□□□ -1.16
HERC4-213ENST00000506515 GIT1Q9Y2X7 761 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 CDY2AQ9Y6F7 541 aa7.78□□□□□ -1.16
HERC4-213ENST00000506515 A0A0G2JNJ9 132 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 TCAF2A6NFQ2 919 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 RFPL1O75677 317 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 FARP2O94887 1054 aaPredicted RBP7.77□□□□□ -1.17
HERC4-213ENST00000506515 COL6A1P12109 1028 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 C5AR1P21730 350 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 TCIRG1Q13488 830 aa7.77□□□□□ -1.17
HERC4-213ENST00000506515 GAREM2Q75VX8 874 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms