RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 FXR1P51114 621 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 INHBEP58166 350 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 RTP1P59025 263 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ZBED6P86452 979 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 SP2Q02086 613 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 CRHR2Q13324 411 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 SYCP1Q15431 976 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 PTPN14Q15678 1187 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 CEP135Q66GS9 1140 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ANO5Q75V66 913 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 CYFIP1Q7L576 1253 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 HS2ST1Q7LGA3 356 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 SLC9A9Q8IVB4 645 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 TRIM59Q8IWR1 403 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ABRAQ8N0Z2 381 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 MCPH1Q8NEM0 835 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ZNF397Q8NF99 534 aaPredicted RBP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 TMEM174Q8WUU8 243 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 BRI3BPQ8WY22 251 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 SEPT1Q8WYJ6 367 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 KIFAP3Q92845 792 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 HVCN1Q96D96 273 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 CEP170P1Q96L14 293 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 FGD4Q96M96 766 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ACCSQ96QU6 501 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 GBP3Q9H0R5 595 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 POLD4Q9HCU8 107 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 ZNF302Q9NR11 478 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 PDLIM7Q9NR12 457 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 NRBP2Q9NSY0 501 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 DMAC2Q9NW81 257 aa8.85□□□□□ -0.99
COL4A5-208ENST00000505728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
COL4A5-208ENST00000505728 SYNGAP1Q96PV0 1343 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 IGSF9BQ9UPX0 1349 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 GSTTP1A0A1W2PQM5 241 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TTC26A0AVF1 554 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 H0YCG3 227 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 K7ENM7 598 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 ZNF862O60290 1169 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 FARP2O94887 1054 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 CYP2C8P10632 490 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TNNT1P13805 278 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TRIM21P19474 475 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 SCP2P22307 547 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 UBA1P22314 1058 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 SMTNP53814 917 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 NCKAP1LP55160 1127 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 NPEPPSP55786 919 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 GTF2BQ00403 316 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 WDR78Q5VTH9 848 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 FAM160B1Q5W0V3 765 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 METTL7BQ6UX53 244 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 NYAP1Q6ZVC0 841 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 CCDC60Q8IWA6 550 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 C12orf56Q8IXR9 622 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 CD99L2Q8TCZ2 262 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 SMCR8Q8TEV9 937 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 EEF2KMTQ96G04 330 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 PARK7Q99497 189 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 DNAJC7Q99615 494 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 NTPCRQ9BSD7 190 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 NIFKQ9BYG3 293 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TTYH3Q9C0H2 523 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 BCAS3Q9H6U6 928 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 MLXIPQ9HAP2 919 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 CYP26B1Q9NR63 512 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 ABHD10Q9NUJ1 306 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 ZNHIT6Q9NWK9 470 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TRMT1Q9NXH9 659 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 ARMCX3Q9UH62 379 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
COL4A5-208ENST00000505728 EXOC7Q9UPT5 735 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 SIK3Q9Y2K2 1263 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 TRIM17Q9Y577 477 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 MCM3APO60318 1980 aa8.84□□□□□ -0.99
COL4A5-208ENST00000505728 RNF225M0QZC1 329 aaPredicted RBP8.83□□□□□ -1
COL4A5-208ENST00000505728 CLIC2O15247 247 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 GGPS1O95749 300 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 PGK2P07205 417 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 HNRNPH3P31942 346 aaKnown RBP8.83□□□□□ -1
COL4A5-208ENST00000505728 RFC5P40937 340 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 STAT5BP51692 787 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 CDK17Q00537 523 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 PRKCEQ02156 737 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 KCNA1Q09470 495 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 KCNH2Q12809 1159 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 MEA1Q16626 185 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 ZNF792Q3KQV3 632 aa8.83□□□□□ -1
COL4A5-208ENST00000505728 ZC2HC1CQ53FD0 456 aaPredicted RBP8.83□□□□□ -1
COL4A5-208ENST00000505728 FAM102BQ5T8I3 360 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms