RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 GPATCH3Q96I76 525 aa5.47□□□□□ -1.53
CHD1-203ENST00000505657 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
CHD1-203ENST00000505657 TOPORSQ9NS56 1045 aaPredicted RBP5.47□□□□□ -1.53
CHD1-203ENST00000505657 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
CHD1-203ENST00000505657 GPR39O43194 453 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 BRINP1O60477 761 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
CHD1-203ENST00000505657 PRKD3O94806 890 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 CLEC2LP0C7M8 214 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 CDKN1CP49918 316 aaPredicted RBP5.46□□□□□ -1.54
CHD1-203ENST00000505657 KIAA2012Q0VF49 1180 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 USP10Q14694 798 aaKnown RBP5.46□□□□□ -1.54
CHD1-203ENST00000505657 PCOLCEQ15113 449 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 TRIM68Q6AZZ1 485 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 KIAA1841Q6NSI8 718 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.54
CHD1-203ENST00000505657 PTPN18Q99952 460 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 PITHD1Q9GZP4 211 aaPredicted RBP5.46□□□□□ -1.54
CHD1-203ENST00000505657 MTG2Q9H4K7 406 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 FBXO10Q9UK96 956 aa5.46□□□□□ -1.54
CHD1-203ENST00000505657 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.45□□□□□ -1.54
CHD1-203ENST00000505657 PRSS38A1L453 326 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 B4GALT4O60513 344 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 CNOT4O95628 575 aaKnown RBP5.45□□□□□ -1.54
CHD1-203ENST00000505657 MANFP55145 182 aaKnown RBP5.45□□□□□ -1.54
CHD1-203ENST00000505657 EVA1CP58658 441 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 ZNF827Q17R98 1081 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 BORAQ6PGQ7 559 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 ESPNLQ6ZVH7 1005 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 RASSF3Q86WH2 238 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 IFNL2Q8IZJ0 200 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 LGI4Q8N135 537 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 ATL2Q8NHH9 583 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 WDR66Q8TBY9 1149 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 SCYL1Q96KG9 808 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 BDH2Q9BUT1 245 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 CARD11Q9BXL7 1154 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 ANO3Q9BYT9 981 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 HAPLN2Q9GZV7 340 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 USP36Q9P275 1121 aaKnown RBP5.45□□□□□ -1.54
CHD1-203ENST00000505657 ATP8A1Q9Y2Q0 1164 aa5.45□□□□□ -1.54
CHD1-203ENST00000505657 OPHN1O60890 802 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 ULK1O75385 1050 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 PCDH8O95206 1070 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 MRE11P49959 708 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 SESN3P58005 492 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 TIGD7Q6NT04 549 aaPredicted RBP5.44□□□□□ -1.54
CHD1-203ENST00000505657 FRMD7Q6ZUT3 714 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 FAM124AQ86V42 546 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 SPATS2Q86XZ4 545 aaKnown RBP5.44□□□□□ -1.54
CHD1-203ENST00000505657 LYSMD2Q8IV50 215 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 RPGRQ92834 1020 aaKnown RBP5.44□□□□□ -1.54
CHD1-203ENST00000505657 FERMT2Q96AC1 680 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 TRIM8Q9BZR9 551 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 TMX1Q9H3N1 280 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 KCMF1Q9P0J7 381 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 DNAI1Q9UI46 699 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 TMPRSS11EQ9UL52 423 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 DENND2AQ9ULE3 1009 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 NOC2LQ9Y3T9 749 aaKnown RBP5.44□□□□□ -1.54
CHD1-203ENST00000505657 COL4A3BPQ9Y5P4 624 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 SLC4A7Q9Y6M7 1214 aa5.44□□□□□ -1.54
CHD1-203ENST00000505657 A0A0A6YYJ9 748 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 A0A0A6YYK5 440 aaPredicted RBP5.43□□□□□ -1.54
CHD1-203ENST00000505657 ANKRD62A6NC57 917 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 RAB11FIP3O75154 756 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 PFKMP08237 780 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 BCAR1P56945 870 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 MAP3K12Q12852 859 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 ADAM15Q13444 863 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 TRIM25Q14258 630 aaKnown RBP5.43□□□□□ -1.54
CHD1-203ENST00000505657 DGKDQ16760 1214 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
CHD1-203ENST00000505657 CT83Q5H943 113 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 ZFYVE27Q5T4F4 411 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 AGBL4Q5VU57 503 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 IQSEC1Q6DN90 963 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 CCDC62Q6P9F0 684 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 RTKN2Q8IZC4 609 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 NKD2Q969F2 451 aaPredicted RBP5.43□□□□□ -1.54
CHD1-203ENST00000505657 SOX7Q9BT81 388 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 MEGF9Q9H1U4 602 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 PCDH12Q9NPG4 1184 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 POLR3BQ9NW08 1133 aaPredicted RBP5.43□□□□□ -1.54
CHD1-203ENST00000505657 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.43□□□□□ -1.54
CHD1-203ENST00000505657 MCM8Q9UJA3 840 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 MYPNQ86TC9 1320 aa5.43□□□□□ -1.54
CHD1-203ENST00000505657 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 MATN2O00339 956 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 LPLP06858 475 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 HNRNPLP14866 589 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHD1-203ENST00000505657 CPEP16870 476 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 CDK11BP21127 795 aaKnown RBP5.42□□□□□ -1.54
CHD1-203ENST00000505657 EPHB4P54760 987 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 ACAP1Q15027 740 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 PITRM1Q5JRX3 1037 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 PRPF38AQ8NAV1 312 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms