RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 UBE2SQ16763 222 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 CABP7Q86V35 215 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 PLA2G4DQ86XP0 818 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 ECHDC2Q86YB7 292 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 NXPE3Q969Y0 559 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 APOL5Q9BWW9 433 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 EMILIN2Q9BXX0 1053 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 IGSF9Q9P2J2 1179 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 CFAP54Q96N23 3096 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 SMCO2A6NFE2 343 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 IPO5O00410 1097 aaKnown RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 SGSM2O43147 1006 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 CLASP2O75122 1294 aaKnown RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 AOC1P19801 751 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 SREBF1P36956 1147 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ADCY7P51828 1080 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ANTXR2P58335 489 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 RBM10P98175 930 aaKnown RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 PTH1RQ03431 593 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 EFCAB12Q6NXP0 572 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ZC3H14Q6PJT7 736 aaKnown RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 LRRC55Q6ZSA7 311 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 SLC39A11Q8N1S5 342 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 FLCNQ8NFG4 579 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 CYP2W1Q8TAV3 490 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 KCNG4Q8TDN1 519 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 CCDC12Q8WUD4 166 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-210ENST00000505589 TMEM40Q8WWA1 233 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 STAMQ92783 540 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ZNF577Q9BSK1 485 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 FBXL21Q9UKT6 434 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
NEDD9-210ENST00000505589 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 ZFHX2Q9C0A1 2572 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 STK25O00506 426 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SH2B2O14492 632 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 IGHDP01880 384 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 LMNAP02545 664 aaKnown RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 VTNP04004 478 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 NEFLP07196 543 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CYP3A4P08684 503 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CTSAP10619 480 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SDHBP21912 280 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 RFX1P22670 979 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 DNM2P50570 870 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 BCAR1P56945 870 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 ITGB3BPQ13352 177 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 RARS2Q5T160 578 aaKnown RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CCDC149Q6ZUS6 474 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 DDX53Q86TM3 631 aaKnown RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SCLT1Q96NL6 688 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 MYL10Q9BUA6 226 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 TRAIPQ9BWF2 469 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 GCOM2Q9BZD3 368 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SFXN1Q9H9B4 322 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 WNT16Q9UBV4 365 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 SAMM50Q9Y512 469 aa11.21□□□□□ -0.61
NEDD9-210ENST00000505589 MYO10Q9HD67 2058 aa11.21□□□□□ -0.62
NEDD9-210ENST00000505589 FNDC1Q4ZHG4 1894 aaPredicted RBP11.21□□□□□ -0.62
NEDD9-210ENST00000505589 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
NEDD9-210ENST00000505589 DMDP11532 3685 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-210ENST00000505589 C22orf31O95567 290 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 ALDH2P05091 517 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 GNA11P29992 359 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 METAP2P50579 478 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD9-210ENST00000505589 ANGPT1Q15389 498 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 GPR149Q86SP6 731 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 EXOC8Q8IYI6 725 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 CCDC105Q8IYK2 499 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 DTWD2Q8NBA8 298 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 RNF169Q8NCN4 708 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 PGBD4Q96DM1 585 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 JPH2Q9BR39 696 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-210ENST00000505589 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 DUSP12Q9UNI6 340 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms