RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 LIMD1Q9UGP4 676 aa18.17■□□□□ 0.5
PDLIM7-213ENST00000505074 SMIM35A0A1B0GVV1 85 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 AOC1P19801 751 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 ANGPT1Q15389 498 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 CWF19L1Q69YN2 538 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 PLPPR4Q7Z2D5 763 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 CCDC12Q8WUD4 166 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 RMDN1Q96DB5 314 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 SEMA4AQ9H3S1 761 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 HCFC2Q9Y5Z7 792 aa18.16■□□□□ 0.5
PDLIM7-213ENST00000505074 EVPLQ92817 2033 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 C9IYK1 514 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 MEIS1O00470 390 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 PPM1AP35813 382 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 CCDC105Q8IYK2 499 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 REXO1Q8N1G1 1221 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 TMEM161AQ9NX61 479 aa18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 DBR1Q9UK59 544 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-213ENST00000505074 GPR182O15218 404 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 REC8O95072 547 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 LMNAP02545 664 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 FGFR1P11362 822 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 HSPA4P34932 840 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 PDXDC2PQ6P474 469 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 NIPA1Q7RTP0 329 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 PHKBQ93100 1093 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 RTP3Q9BQQ7 232 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 ZNF577Q9BSK1 485 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 ELAC1Q9H777 363 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 USTQ9Y2C2 406 aa18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-213ENST00000505074 FAM86B1E9PN63 330 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 IPO5O00410 1097 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 PI15O43692 258 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 FAM86B2P0C5J1 330 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 PSMA5P28066 241 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 GNA11P29992 359 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 SLC26A2P50443 739 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 PUM1Q14671 1186 aaKnown RBP eCLIP18.13■□□□□ 0.493e-7■□□□□ 10.6
PDLIM7-213ENST00000505074 ATAT1Q5SQI0 421 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 RARS2Q5T160 578 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 KIAA1841Q6NSI8 718 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 MIS18BP1Q6P0N0 1132 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 MTHFD1LQ6UB35 978 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 TRMT1LQ7Z2T5 733 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 MRPL43Q8N983 215 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 DTWD2Q8NBA8 298 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 TMEM117Q9H0C3 514 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 ZNF302Q9NR11 478 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 CYP26B1Q9NR63 512 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 ST3GAL5Q9UNP4 418 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 DENND4AQ7Z401 1863 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 ZNF292O60281 2723 aa18.13■□□□□ 0.49
PDLIM7-213ENST00000505074 HOXA2O43364 376 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 HBP1O60381 514 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 CCNE2O96020 404 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 CCT2P78371 535 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 CCDC60Q8IWA6 550 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 KIAA2013Q8IYS2 634 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 SPG21Q9NZD8 308 aa18.12■□□□□ 0.49
PDLIM7-213ENST00000505074 CACNA1BQ00975 2339 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 C2orf71A6NGG8 1288 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 PRPF3O43395 683 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 CLASP2O75122 1294 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 ATG7O95352 703 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 EOMESO95936 686 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 NPR3P17342 541 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 KLRC1P26715 233 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 CA8P35219 290 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 FAM189BP81408 668 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 PRR16Q569H4 304 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 SWSAP1Q6NVH7 229 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 ABHD15Q6UXT9 468 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 LRRC55Q6ZSA7 311 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 ABI1Q8IZP0 508 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 CCDC148Q8NFR7 591 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 KCNB2Q92953 911 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 ACSF2Q96CM8 615 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 PPP1R16BQ96T49 567 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 CDHR5Q9HBB8 845 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms