RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SLC5A4Q9NY91 659 aa14.62□□□□□ -0.07
LMNA-220ENST00000504687 SIK3Q9Y2K2 1263 aa14.62□□□□□ -0.07
LMNA-220ENST00000504687 GAS2O43903 313 aaKnown RBP14.61□□□□□ -0.07
LMNA-220ENST00000504687 ARIH2O95376 493 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 HOXC6P09630 235 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 STAT5BP51692 787 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 SMTNP53814 917 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 NPEPPSP55786 919 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 ENPEPQ07075 957 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 UTP14CQ5TAP6 766 aaKnown RBP14.61□□□□□ -0.07
LMNA-220ENST00000504687 TAPT1Q6NXT6 567 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 HAUS6Q7Z4H7 955 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
LMNA-220ENST00000504687 ACCSQ96QU6 501 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 DNAJC7Q99615 494 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 BAG1Q99933 345 aaPredicted RBP14.61□□□□□ -0.07
LMNA-220ENST00000504687 MLXIPQ9HAP2 919 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 ATP6V0A4Q9HBG4 840 aa14.61□□□□□ -0.07
LMNA-220ENST00000504687 GTPBP10A4D1E9 387 aaKnown RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 NKRFO15226 690 aaKnown RBP eCLIP14.6□□□□□ -0.07
LMNA-220ENST00000504687 OFD1O75665 1012 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 TUBB4AP04350 444 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 CASP14P31944 242 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 PSMC2P35998 433 aaKnown RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 TCF7P36402 384 aaPredicted RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.075e-7■■■■□ 19.8
LMNA-220ENST00000504687 CDK17Q00537 523 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 DMP1Q13316 513 aaPredicted RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 LAMC2Q13753 1193 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 CCDC40Q4G0X9 1142 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 MAP4K3Q8IVH8 894 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 TMEM161BQ8NDZ6 487 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 XPNPEP1Q9NQW7 623 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 AGPAT3Q9NRZ7 376 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 ARMCX3Q9UH62 379 aaPredicted RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 SEPT9Q9UHD8 586 aaPredicted RBP14.6□□□□□ -0.07
LMNA-220ENST00000504687 EXOC7Q9UPT5 735 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 TELO2Q9Y4R8 837 aa14.6□□□□□ -0.07
LMNA-220ENST00000504687 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 FAM155AB1AL88 458 aaPredicted RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 K7ENM7 598 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
LMNA-220ENST00000504687 EPB41P11171 864 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 HOXD8P13378 290 aaPredicted RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 HNRNPH3P31942 346 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 NPTX2P47972 431 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 TM4SF4P48230 202 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 ZBED6P86452 979 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 KCNA1Q09470 495 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 SREBF2Q12772 1141 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 MKRN3Q13064 507 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 PPP2R5AQ15172 486 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 SYCP1Q15431 976 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 LY6KQ17RY6 165 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 MORN1Q5T089 497 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 WDR78Q5VTH9 848 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 C17orf99Q6UX52 265 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 IFNL1Q8IU54 200 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 TMTC1Q8IUR5 882 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 CCAR2Q8N163 923 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 OR8K1Q8NGG5 319 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 AZI2Q9H6S1 392 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 ARHGAP28Q9P2N2 729 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 LUC7L2Q9Y383 392 aaKnown RBP14.59□□□□□ -0.07
LMNA-220ENST00000504687 DAAM1Q9Y4D1 1078 aa14.59□□□□□ -0.07
LMNA-220ENST00000504687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
LMNA-220ENST00000504687 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 TTC26A0AVF1 554 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 TMEM150BA6NC51 233 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 TLR2O60603 784 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 MAFO75444 373 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 AKAP3O75969 853 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 GH1P01241 217 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 TXNP10599 105 aaKnown RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 ARL2P36404 184 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 PEX3P56589 373 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 ARHGAP1Q07960 439 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 HSP90AA2PQ14568 343 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 EMC2Q15006 297 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 MEA1Q16626 185 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 FAM102BQ5T8I3 360 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 E4F1Q66K89 784 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 CREBRFQ8IUR6 639 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 ATP8B4Q8TF62 1192 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 USP6NLQ92738 828 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 JPH2Q9BR39 696 aaPredicted RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.08
LMNA-220ENST00000504687 ABHD16BQ9H3Z7 469 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 SMARCAD1Q9H4L7 1026 aa14.58□□□□□ -0.08
LMNA-220ENST00000504687 TBX20Q9UMR3 447 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms