RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CEP170Q5SW79 1584 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 MEFVO15553 781 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 DAB1O75553 588 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CIB2O75838 187 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PGM3O95394 542 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 MUTP22033 750 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 DNAJB1P25685 340 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF852Q6ZMS4 543 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 MAMSTRQ6ZN01 415 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 IKBIPQ70UQ0 350 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 HDDC2Q7Z4H3 204 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC116Q8IYX3 515 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 XXYLT1Q8NBI6 393 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 COG3Q96JB2 828 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 HAUS4Q9H6D7 363 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PPANQ9NQ55 473 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 INTS9Q9NV88 658 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 HPS5Q9UPZ3 1129 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PLAAQ9Y263 795 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 HTR3EA5X5Y0 456 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 IKBKBO14920 756 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CDC45O75419 566 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ARF4P18085 180 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PAMP19021 973 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 GARTP22102 1010 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 SERPINB6P35237 376 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 LGALS3BPQ08380 585 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 MTMR3Q13615 1198 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 DUS1LQ6P1R4 473 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CASC4Q6P4E1 433 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 C4orf50Q6ZRC1 276 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NYAP1Q6ZVC0 841 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 IFT20Q8IY31 132 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF366Q8N895 744 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 SSH3Q8TE77 659 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ASB12Q8WXK4 309 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NUSAP1Q9BXS6 441 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CHRAC1Q9NRG0 131 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 C20orf96Q9NUD7 363 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CLIC5Q9NZA1 410 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PDP2Q9P2J9 529 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 SESN1Q9Y6P5 492 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 VWA5AO00534 786 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ALOX5P09917 674 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 SLC5A1P13866 664 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF45Q02386 682 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PTK7Q13308 1070 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 HADHQ16836 314 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 METTL11BQ5VVY1 283 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CYB5D1Q6P9G0 228 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ARHGEF18Q6ZSZ5 1173 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 GALNT15Q8N3T1 639 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF527Q8NB42 609 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 LENG1Q96BZ8 264 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 DNAJC25Q9H1X3 360 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MARCH7Q9H992 704 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 LZTFL1Q9NQ48 299 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MTF2Q9Y483 593 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 M0QX08 132 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PEX1O43933 1283 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TCEA3O75764 348 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 KRT19P08727 400 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 USP46P62068 366 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 LONRF2Q1L5Z9 754 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CREB3L3Q68CJ9 461 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF746Q6NUN9 644 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC81Q6ZN84 652 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 BZW1Q7L1Q6 419 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 OR8K3Q8NH51 312 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ANKRD27Q96NW4 1050 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 GPATCH1Q9BRR8 931 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 FANCLQ9NW38 375 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 UCKL1Q9NWZ5 548 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 POM121CA8CG34 1229 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 UBXN8O00124 270 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CTIFO43310 598 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 DDR1Q08345 913 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MORF4L2Q15014 288 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 C16orf86Q6ZW13 317 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TBC1D21Q8IYX1 336 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CSGALNACT2Q8N6G5 542 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MYCBPAPQ8TBZ2 947 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PGBD4Q96DM1 585 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 IL1RAPL1Q9NZN1 696 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ERVK-19Q9WJR5 959 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CASKIN1Q8WXD9 1431 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 IFIT3O14879 490 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ANP32DO95626 131 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 OCM2P0CE71 109 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 OCMP0CE72 109 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CES1P23141 567 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 POLA2Q14181 598 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PON2Q15165 354 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 SSX2Q16385 188 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms