RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TMOD1P28289 359 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 IRS1P35568 1242 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 DLX2Q07687 328 aaPredicted RBP18.29■□□□□ 0.52
SCLT1-204ENST00000503215 TBC1D8BQ0IIM8 1120 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 XKR3Q5GH77 459 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 PLA2G4FQ68DD2 849 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 ANO5Q75V66 913 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 NEK8Q86SG6 692 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 ZNF579Q8NAF0 562 aaKnown RBP18.29■□□□□ 0.52
SCLT1-204ENST00000503215 TNFRSF25Q93038 417 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 PABPC5Q96DU9 382 aaKnown RBP18.29■□□□□ 0.52
SCLT1-204ENST00000503215 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 WRAP73Q9P2S5 460 aaPredicted RBP18.29■□□□□ 0.52
SCLT1-204ENST00000503215 LINC01565O15544 149 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 CCNT1O60563 726 aaKnown RBP18.28■□□□□ 0.52
SCLT1-204ENST00000503215 MMP1P03956 469 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 DARSP14868 501 aaKnown RBP18.28■□□□□ 0.52
SCLT1-204ENST00000503215 NEK4P51957 841 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 PTCRAQ6ISU1 281 aaPredicted RBP18.28■□□□□ 0.52
SCLT1-204ENST00000503215 ADGRD2Q7Z7M1 963 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 NSUN7Q8NE18 718 aaKnown RBP18.28■□□□□ 0.52
SCLT1-204ENST00000503215 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 LMAN2LQ9H0V9 348 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 TYW1Q9NV66 732 aaKnown RBP18.28■□□□□ 0.52
SCLT1-204ENST00000503215 CLDND1Q9NY35 253 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 RAPGEFL1Q9UHV5 662 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 KIAA1671Q9BY89 1806 aa18.28■□□□□ 0.52
SCLT1-204ENST00000503215 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 GRXCR2A6NFK2 248 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 WNT7AO00755 349 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 NPEPPSP55786 919 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 PPP2R5CQ13362 524 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 CTC1Q2NKJ3 1217 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 ODR4Q5SWX8 454 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 LRRC55Q6ZSA7 311 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 KSR1Q8IVT5 923 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 P2RX5Q93086 422 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 FAM20AQ96MK3 541 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 TMEM161AQ9NX61 479 aa18.27■□□□□ 0.51
SCLT1-204ENST00000503215 XBP1P17861 261 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 PSMC5P62195 406 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 CLUL1Q15846 466 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 POF1BQ8WVV4 589 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 NLRP7Q8WX94 980 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 CWH43Q9H720 699 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 ATP6V0A4Q9HBG4 840 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 RGL1Q9NZL6 768 aa18.26■□□□□ 0.51
SCLT1-204ENST00000503215 FNDC1Q4ZHG4 1894 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-204ENST00000503215 A0A087WZ62 844 aa18.25■□□□□ 0.51
SCLT1-204ENST00000503215 ZBTB39O15060 712 aa18.25■□□□□ 0.51
SCLT1-204ENST00000503215 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
SCLT1-204ENST00000503215 ECHDC2Q86YB7 292 aa18.25■□□□□ 0.51
SCLT1-204ENST00000503215 CASD1Q96PB1 797 aa18.25■□□□□ 0.51
SCLT1-204ENST00000503215 FDXACB1Q9BRP7 624 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-204ENST00000503215 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-204ENST00000503215 BTBD18B2RXH4 712 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 TBX10O75333 385 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 MAFO75444 373 aaPredicted RBP18.24■□□□□ 0.51
SCLT1-204ENST00000503215 GCFC2P16383 781 aaKnown RBP18.24■□□□□ 0.51
SCLT1-204ENST00000503215 ATF7P17544 494 aaPredicted RBP18.24■□□□□ 0.51
SCLT1-204ENST00000503215 KRT2P35908 639 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 QARSP47897 775 aaKnown RBP18.24■□□□□ 0.51
SCLT1-204ENST00000503215 SPIRE1Q08AE8 756 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 NAALADL2Q58DX5 795 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 CLLU1OSQ5K130 101 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 COLGALT1Q8NBJ5 622 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 RNF169Q8NCN4 708 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 ELAC1Q9H777 363 aaKnown RBP18.24■□□□□ 0.51
SCLT1-204ENST00000503215 CYP26B1Q9NR63 512 aa18.24■□□□□ 0.51
SCLT1-204ENST00000503215 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
SCLT1-204ENST00000503215 PBX3P40426 434 aa18.23■□□□□ 0.51
SCLT1-204ENST00000503215 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
SCLT1-204ENST00000503215 ZNF598Q86UK7 904 aaKnown RBP18.23■□□□□ 0.51
SCLT1-204ENST00000503215 RHPN2Q8IUC4 686 aa18.23■□□□□ 0.51
SCLT1-204ENST00000503215 WASF1Q92558 559 aa18.23■□□□□ 0.51
SCLT1-204ENST00000503215 BMP2KQ9NSY1 1161 aaPredicted RBP18.23■□□□□ 0.51
SCLT1-204ENST00000503215 TBX3O15119 743 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 FGF18O76093 207 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 P4HBP07237 508 aaKnown RBP18.22■□□□□ 0.51
SCLT1-204ENST00000503215 ERVFC1P60507 584 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 RBM10P98175 930 aaKnown RBP18.22■□□□□ 0.51
SCLT1-204ENST00000503215 ADAM15Q13444 863 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 CTTNQ14247 550 aaKnown RBP18.22■□□□□ 0.51
SCLT1-204ENST00000503215 EPHA7Q15375 998 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 FAM43BQ6ZT52 329 aaPredicted RBP18.22■□□□□ 0.51
SCLT1-204ENST00000503215 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 TMEM143Q96AN5 459 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 GCOM2Q9BZD3 368 aaPredicted RBP18.22■□□□□ 0.51
SCLT1-204ENST00000503215 TMEM117Q9H0C3 514 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 PCDHB12Q9Y5F1 795 aa18.22■□□□□ 0.51
SCLT1-204ENST00000503215 PLXNA4Q9HCM2 1894 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms