RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ANKRD35Q8N283 1001 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 C2orf69Q8N8R5 385 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 SLC7A6OSQ96CW6 309 aaPredicted RBP6.09□□□□□ -1.43
SMC4-227ENST00000497984 AGAP2Q99490 1192 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 BOCQ9BWV1 1114 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 MRPL4Q9BYD3 311 aaKnown RBP6.09□□□□□ -1.43
SMC4-227ENST00000497984 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 MAGEL2Q9UJ55 1249 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 PRLP01236 227 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 TGM1P22735 817 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 MECP2P51608 486 aaKnown RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 SESN2P58004 480 aaPredicted RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 NANOS3P60323 173 aaKnown RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 MRGPRGQ86SM5 289 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 ULK2Q8IYT8 1036 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 OR5AN1Q8NGI8 311 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 NKD2Q969F2 451 aaPredicted RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 MIEF2Q96C03 454 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 GPRC5BQ9NZH0 403 aa6.08□□□□□ -1.44
SMC4-227ENST00000497984 SAE1Q9UBE0 346 aaPredicted RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 REXO2Q9Y3B8 237 aaKnown RBP6.08□□□□□ -1.44
SMC4-227ENST00000497984 DVL2O14641 736 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
SMC4-227ENST00000497984 APPP05067 770 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 FNTBP49356 437 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 RGS3P49796 1198 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 RPL10LQ96L21 214 aaKnown RBP6.07□□□□□ -1.44
SMC4-227ENST00000497984 DNAJC7Q99615 494 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 HIRIP3Q9BW71 556 aaPredicted RBP6.07□□□□□ -1.44
SMC4-227ENST00000497984 DENND2AQ9ULE3 1009 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 DMRT1Q9Y5R6 373 aa6.07□□□□□ -1.44
SMC4-227ENST00000497984 RBM8AQ9Y5S9 174 aaKnown RBP6.07□□□□□ -1.44
SMC4-227ENST00000497984 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 BPIFB4P59827 614 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 SLC6A3Q01959 620 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 RBL2Q08999 1139 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 TOB2Q14106 344 aaPredicted RBP6.06□□□□□ -1.44
SMC4-227ENST00000497984 GAREM2Q75VX8 874 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 ANKRD53Q8N9V6 530 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 ZSWIM2Q8NEG5 633 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 PRRX2Q99811 253 aa6.06□□□□□ -1.44
SMC4-227ENST00000497984 GTF2F1P35269 517 aaKnown RBP eCLIP6.05□□□□□ -1.448e-49■■■■■ 172.1
SMC4-227ENST00000497984 ROM1Q03395 351 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 COL10A1Q03692 680 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 TCIRG1Q13488 830 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 DGKDQ16760 1214 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 FAM111BQ6SJ93 734 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 GCDHQ92947 438 aaPredicted RBP6.05□□□□□ -1.44
SMC4-227ENST00000497984 E2F7Q96AV8 911 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 ARMC5Q96C12 935 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 MAML3Q96JK9 1138 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
SMC4-227ENST00000497984 UBE2QL1A1L167 161 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 KRT37O76014 449 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 MAN2A2P49641 1150 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 KIF11P52732 1056 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 RABGGTBP53611 331 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 CNGB1Q14028 1251 aaPredicted RBP6.04□□□□□ -1.44
SMC4-227ENST00000497984 ELAVL1Q15717 326 aaKnown RBP6.04□□□□□ -1.44
SMC4-227ENST00000497984 ARHGAP44Q17R89 818 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 CLEC14AQ86T13 490 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 RPUSD2Q8IZ73 545 aaKnown RBP6.04□□□□□ -1.44
SMC4-227ENST00000497984 THAP3Q8WTV1 239 aaPredicted RBP6.04□□□□□ -1.44
SMC4-227ENST00000497984 HAPLN2Q9GZV7 340 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 NCOA5Q9HCD5 579 aaKnown RBP6.04□□□□□ -1.44
SMC4-227ENST00000497984 IL23AQ9NPF7 189 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 PTCH2Q9Y6C5 1203 aa6.04□□□□□ -1.44
SMC4-227ENST00000497984 XDHP47989 1333 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 KLRG2A4D1S0 409 aaPredicted RBP6.03□□□□□ -1.44
SMC4-227ENST00000497984 M0R2C6 588 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 FOXN1O15353 648 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
SMC4-227ENST00000497984 SLFN12LQ6IEE8 588 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 HTR3DQ70Z44 454 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 DNAJC10Q8IXB1 793 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 ZG16BQ96DA0 208 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 KCMF1Q9P0J7 381 aa6.03□□□□□ -1.44
SMC4-227ENST00000497984 TRAF5O00463 557 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 RAMP2O60895 175 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 VSIG10L2P0DP72 767 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 C1QL3Q5VWW1 255 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 ZCCHC8Q6NZY4 707 aaKnown RBP6.02□□□□□ -1.45
SMC4-227ENST00000497984 ZNF662Q6ZS27 426 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 PLA2G15Q8NCC3 412 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 C16orf92Q96LL3 132 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
SMC4-227ENST00000497984 TCF25Q9BQ70 676 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 TTPALQ9BTX7 342 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 GPR87Q9BY21 358 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 ACSS2Q9NR19 701 aa6.02□□□□□ -1.45
SMC4-227ENST00000497984 UBA6A0AVT1 1052 aaPredicted RBP6.01□□□□□ -1.45
SMC4-227ENST00000497984 TOX4O94842 621 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 C2orf27AQ580R0 203 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 TTC38Q5R3I4 469 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 BMP8AQ7Z5Y6 402 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms