RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 SH3BP1Q9Y3L3 701 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 C2orf78A6NCI8 922 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 CAPN14A8MX76 684 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 TRAF5O00463 557 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 CYP27B1O15528 508 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 ASLP04424 464 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 IGFALSP35858 605 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 KIF11P52732 1056 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 ANTXR2P58335 489 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 ADAM8P78325 824 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 PURAQ00577 322 aaKnown RBP5.28□□□□□ -1.56
CBX3-208ENST00000497498 DPTQ07507 201 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 TUBA3CQ13748 450 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 CRB2Q5IJ48 1285 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 TUBA3EQ6PEY2 450 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 OR5AN1Q8NGI8 311 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 PMFBP1Q8TBY8 1022 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
CBX3-208ENST00000497498 C16orf92Q96LL3 132 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 TRIM8Q9BZR9 551 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 KCMF1Q9P0J7 381 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 SAMD15Q9P1V8 674 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 DENND2AQ9ULE3 1009 aa5.28□□□□□ -1.56
CBX3-208ENST00000497498 A0A1W2PRX2 142 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 DNAJC8O75937 253 aaPredicted RBP5.27□□□□□ -1.57
CBX3-208ENST00000497498 KRT37O76014 449 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 CYP17A1P05093 508 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 STAT3P40763 770 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 RRP1BQ14684 758 aaKnown RBP5.27□□□□□ -1.57
CBX3-208ENST00000497498 DGKDQ16760 1214 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 SLFN12LQ6IEE8 588 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 ANKRD35Q8N283 1001 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 GPHA2Q96T91 129 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 OSBPL2Q9H1P3 480 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 MAGEL2Q9UJ55 1249 aa5.27□□□□□ -1.57
CBX3-208ENST00000497498 WDR33Q9C0J8 1336 aaKnown RBP5.26□□□□□ -1.57
CBX3-208ENST00000497498 PTPDC1A2A3K4 754 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 SQSTM1Q13501 440 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 ACAP1Q15027 740 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 GAGE13Q4V321 117 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 TTC38Q5R3I4 469 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 NME9Q86XW9 330 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 GCDHQ92947 438 aaPredicted RBP5.26□□□□□ -1.57
CBX3-208ENST00000497498 CHFRQ96EP1 664 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 PARPBPQ9NWS1 579 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 PODXL2Q9NZ53 605 aa5.26□□□□□ -1.57
CBX3-208ENST00000497498 CDK11AQ9UQ88 783 aaPredicted RBP5.26□□□□□ -1.57
CBX3-208ENST00000497498 TNPO3Q9Y5L0 923 aaKnown RBP5.26□□□□□ -1.57
CBX3-208ENST00000497498 RBM8AQ9Y5S9 174 aaKnown RBP5.26□□□□□ -1.57
CBX3-208ENST00000497498 UBA6A0AVT1 1052 aaPredicted RBP5.25□□□□□ -1.57
CBX3-208ENST00000497498 H7C1D1 291 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 PEX11BO96011 259 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 BPIFB4P59827 614 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 TCIRG1Q13488 830 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 ZNF460Q14592 562 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 EPHA7Q15375 998 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 NFE2L2Q16236 605 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 BMP8AQ7Z5Y6 402 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 CLEC14AQ86T13 490 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 KIAA1958Q8N8K9 716 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 ANKRD53Q8N9V6 530 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 ZNF483Q8TF39 744 aaPredicted RBP5.25□□□□□ -1.57
CBX3-208ENST00000497498 MIEF2Q96C03 454 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 RPL10LQ96L21 214 aaKnown RBP5.25□□□□□ -1.57
CBX3-208ENST00000497498 IKZF4Q9H2S9 585 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 PCIF1Q9H4Z3 704 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 MMRN2Q9H8L6 949 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 CABP5Q9NP86 173 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 B4GALT6Q9UBX8 382 aa5.25□□□□□ -1.57
CBX3-208ENST00000497498 CBX4O00257 560 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 OPA1O60313 960 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 MAKP20794 623 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 PTX3P26022 381 aaPredicted RBP5.24□□□□□ -1.57
CBX3-208ENST00000497498 BCAR1P56945 870 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 ZNF174Q15697 407 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 FAM111BQ6SJ93 734 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 GAREM2Q75VX8 874 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 KANSL1Q7Z3B3 1105 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
CBX3-208ENST00000497498 DYDC2Q96IM9 177 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
CBX3-208ENST00000497498 DNAJC2Q99543 621 aaKnown RBP5.24□□□□□ -1.57
CBX3-208ENST00000497498 UBE2QL1A1L167 161 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 RANGAP1P46060 587 aaPredicted RBP5.23□□□□□ -1.57
CBX3-208ENST00000497498 SCNN1GP51170 649 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 INHBCP55103 352 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 CRHR2Q13324 411 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 MYBPC3Q14896 1274 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 PIK3R6Q5UE93 754 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 PRAMEF9Q5VWM5 478 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 CREB3L3Q68CJ9 461 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 Q6ZRM9 215 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 LDLRAD3Q86YD5 345 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 PLA2G15Q8NCC3 412 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 LARP4BQ92615 738 aaKnown RBP5.23□□□□□ -1.57
CBX3-208ENST00000497498 TUBGCP5Q96RT8 1024 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 ORAI3Q9BRQ5 295 aa5.23□□□□□ -1.57
CBX3-208ENST00000497498 PITHD1Q9GZP4 211 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms