RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 UPP2O95045 317 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 YWHABP31946 246 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 BMPR1AP36894 532 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 RFC5P40937 340 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 GUCY1B3Q02153 619 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 MTERF2Q49AM1 385 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 FAM117BQ6P1L5 589 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 MAP7D2Q96T17 732 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 YME1L1Q96TA2 773 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 ADAM2Q99965 735 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 C5orf42Q9H799 3197 aa12.21□□□□□ -0.46
SHROOM3-210ENST00000497440 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.46
SHROOM3-210ENST00000497440 A0A0U1RQF3 1178 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 ZNF623O75123 536 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 MUTP22033 750 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 TXKP42681 527 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 NFX1Q12986 1120 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 CAMK1Q14012 370 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 PDIA5Q14554 519 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 NAALADL2Q58DX5 795 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 TRMT1LQ7Z2T5 733 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 P2RX5Q93086 422 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
SHROOM3-210ENST00000497440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 ASAP2O43150 1006 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 STAG3L1P0CL83 205 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 RPA1P27694 616 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 ARL2P36404 184 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 RARRES1P49788 294 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 DNM2P50570 870 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 CTTNQ14247 550 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 PLA2G4FQ68DD2 849 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 FIBCD1Q8N539 461 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 PRDM6Q9NQX0 595 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 AKT3Q9Y243 479 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 NLRC5Q86WI3 1866 aa12.19□□□□□ -0.46
SHROOM3-210ENST00000497440 A0A087WZ62 844 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 POTEMA6NI47 508 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 MED24O75448 989 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 EOMESO95936 686 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 IGFBP4P22692 258 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 HOXA11P31270 313 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 MCM7P33993 719 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 PRPHP41219 470 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 ZNF174Q15697 407 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 IL17AQ16552 155 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 TTC38Q5R3I4 469 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 NCAPH2Q6IBW4 605 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 FERMT3Q86UX7 667 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 KSR1Q8IVT5 923 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 FDXACB1Q9BRP7 624 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 INO80BQ9C086 356 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 COL4A4P53420 1690 aaPredicted RBP12.18□□□□□ -0.46
SHROOM3-210ENST00000497440 TRIOO75962 3097 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 ARID2Q68CP9 1835 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 LAD1O00515 517 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 DGAT1O75907 488 aa12.17□□□□□ -0.46
SHROOM3-210ENST00000497440 BMP1P13497 986 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms