RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NR2E3Q9Y5X4 410 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 MRFAP1Q9Y605 127 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ACTL7BQ9Y614 415 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 RGPD8O14715 1765 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 IQGAP3Q86VI3 1631 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FRMPD2Q68DX3 1309 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 CNTNAP4Q9C0A0 1308 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ABCA12Q86UK0 2595 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 PTPDC1A2A3K4 754 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 A6NNZ2 444 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM227AF5H4B4 570 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 H0Y8X5 98 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 IGF2BP3O00425 579 aaKnown RBP eCLIP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 PMM2O15305 246 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 DDX3YO15523 660 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 MEFVO15553 781 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 OIP5O43482 229 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FRS3O43559 492 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF205O95201 554 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 EOMESO95936 686 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SOD2P04179 222 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 POU2F2P09086 479 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SETSIPP0DME0 302 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLURP2P0DP57 97 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZKSCAN1P17029 563 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ENDOUP21128 410 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 AGXTP21549 392 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 HMGB2P26583 209 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TPP2P29144 1249 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 CHRNA5P30532 468 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 LSP1P33241 339 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 DDIT3P35638 169 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 IL12RB1P42701 662 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 AGFG1P52594 562 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM193AP78312 1265 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SNW1Q13573 536 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SEMA5AQ13591 1074 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SIM2Q14190 667 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ALFQ53S48 1182 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM47CQ5HY64 1035 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 BROXQ5VW32 411 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 KCNK18Q7Z418 384 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 MTDHQ86UE4 582 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 NOSTRINQ8IVI9 506 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TEX2Q8IWB9 1127 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 AMOTL1Q8IY63 956 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMAP1Q8IYB5 467 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZZZ3Q8IYH5 903 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FMR1NBQ8N0W7 255 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF655Q8N720 491 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TEX19Q8NA77 164 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 DTWD2Q8NBA8 298 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 RCBTB1Q8NDN9 531 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ADCY4Q8NFM4 1077 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 UBASH3BQ8TF42 649 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 DIS3LQ8TF46 1054 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 DLG3Q92796 817 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FBXW5Q969U6 566 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 PGBD4Q96DM1 585 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 BTBD6Q96KE9 485 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SGCZQ96LD1 299 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TEKT5Q96M29 485 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 Q96M66 194 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FCRL3Q96P31 734 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ALG1Q9BT22 464 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLC12A9Q9BXP2 914 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 EPHX3Q9H6B9 360 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZMAT4Q9H898 229 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 RSAD1Q9HA92 442 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 RC3H2Q9HBD1 1191 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 CHST7Q9NS84 486 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 RAD18Q9NS91 495 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TRMT13Q9NUP7 481 aaKnown RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM105AQ9NUU6 356 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 C14orf119Q9NWQ9 140 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TMEFF2Q9UIK5 374 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 GPR55Q9Y2T6 319 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 IPPQ9Y573 584 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 B3GALT1Q9Y5Z6 326 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 CCDC88AQ3V6T2 1871 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 LY75O60449 1722 aa3.04□□□□□ -1.92
CKS1BP2-201ENST00000497342 TRPM7Q96QT4 1865 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PLEKHH1Q9ULM0 1364 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 WDR17Q8IZU2 1322 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 IRS2Q9Y4H2 1338 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CCDC66A2RUB6 948 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CFAP69A5D8W1 941 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 C2orf71A6NGG8 1288 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 WTIPA6NIX2 430 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRRT4C9JH25 899 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM47E-STBD1D6RA91 191 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 H7BY64 318 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 DVL2O14641 736 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PIP5K1CO60331 668 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CELF2O95319 508 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 WISP1O95388 367 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRAMEF1O95521 474 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 MYL3P08590 195 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 RPL17P18621 184 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CYP7A1P22680 504 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms