RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ZSCAN23Q3MJ62 389 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 GDF6Q6KF10 455 aaPredicted RBP24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 LINC01465Q8N7H1 131 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 ANKLE1Q8NAG6 615 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 KIFAP3Q92845 792 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 DRC1Q96MC2 740 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 SENP6Q9GZR1 1112 aaPredicted RBP24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 GZF1Q9H116 711 aaPredicted RBP24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 PCDHA2Q9Y5H9 948 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 COL4A3BPQ9Y5P4 624 aa24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 FAM13AO94988 1023 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 CAPN2P17655 700 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 ARL2P36404 184 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 PTPN11Q06124 597 aaPredicted RBP24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 EHHADHQ08426 723 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 KCNB1Q14721 858 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 HERC4Q5GLZ8 1057 aaPredicted RBP24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 IER5Q5VY09 327 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 PARVGQ9HBI0 331 aa24.14■■□□□ 1.45
ECHDC3-205ENST00000496136 A0A0U1RQG5 324 aaPredicted RBP24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 BIN1O00499 593 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 RHOBTB3O94955 611 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 DNM2P50570 870 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 CLCN3P51790 818 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 COASYQ13057 564 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 ISM2Q6H9L7 571 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 MYCT1Q8N699 235 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 TCP11Q8WWU5 503 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 POLR3FQ9H1D9 316 aaPredicted RBP24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 MAN1B1Q9UKM7 699 aa24.13■■□□□ 1.45
ECHDC3-205ENST00000496136 SYCE3A1L190 88 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 ARVCFO00192 962 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 TMOD1P28289 359 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 KIAA0319LQ8IZA0 1049 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 DIS3LQ8TF46 1054 aaKnown RBP24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 PRPF31Q8WWY3 499 aaKnown RBP24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 HPS3Q969F9 1004 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 RMND1Q9NWS8 449 aa24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 LARSQ9P2J5 1176 aaKnown RBP24.12■■□□□ 1.45
ECHDC3-205ENST00000496136 CYP2C9P11712 490 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 COL6A1P12109 1028 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 PLS3P13797 630 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 GAP43P17677 238 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 CDK7P50613 346 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 RTP1P59025 263 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 CCDC47Q96A33 483 aaKnown RBP24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 CTAGE1Q96RT6 745 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 C17orf75Q9HAS0 396 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 EXOC1Q9NV70 894 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 SUCLA2Q9P2R7 463 aaPredicted RBP24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 SMIM35A0A1B0GVV1 85 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 ODR4Q5SWX8 454 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 RUFY4Q6ZNE9 571 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 SFR1Q86XK3 245 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 BSNDQ8WZ55 320 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 SEZ6LQ9BYH1 1024 aa24.11■■□□□ 1.45
ECHDC3-205ENST00000496136 BMP6P22004 513 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 GLRA2P23416 452 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 PEX3P56589 373 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 PSMD2Q13200 908 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 MORC3Q14149 939 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 PTGISQ16647 500 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 ASAP3Q8TDY4 903 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 PSPC1Q8WXF1 523 aaKnown RBP24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 TBC1D7Q9P0N9 293 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 SEL1LQ9UBV2 794 aa24.1■■□□□ 1.45
ECHDC3-205ENST00000496136 STK4Q13043 487 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 MXD4Q14582 209 aaPredicted RBP24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 SASS6Q6UVJ0 657 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 SLC39A5Q6ZMH5 540 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 KSR1Q8IVT5 923 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 TRIML1Q8N9V2 468 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 PAWRQ96IZ0 340 aaKnown RBP24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 FIZ1Q96SL8 496 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 NTPCRQ9BSD7 190 aaKnown RBP24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 OLFML3Q9NRN5 406 aa24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 TRMT13Q9NUP7 481 aaKnown RBP24.09■■□□□ 1.45
ECHDC3-205ENST00000496136 LAMTOR4Q0VGL1 99 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 SERINC5Q86VE9 423 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 RHPN2Q8IUC4 686 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 DNAJB3Q8WWF6 145 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 IFT74Q96LB3 600 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 FAM49AQ9H0Q0 323 aaPredicted RBP24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 SLC39A2Q9NP94 309 aa24.08■■□□□ 1.45
ECHDC3-205ENST00000496136 ASAP2O43150 1006 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 EN2P19622 333 aaPredicted RBP24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 NPTX2P47972 431 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 DMP1Q13316 513 aaPredicted RBP24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 FAM26FQ5R3K3 315 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 ZNF658Q5TYW1 1059 aaPredicted RBP24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 TAF2Q6P1X5 1199 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 FAM178BQ8IXR5 827 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 MRPL44Q9H9J2 332 aaKnown RBP24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 AKT3Q9Y243 479 aa24.08■■□□□ 1.44
ECHDC3-205ENST00000496136 B4GALT4O60513 344 aa24.07■■□□□ 1.44
ECHDC3-205ENST00000496136 VTNP04004 478 aa24.07■■□□□ 1.44
ECHDC3-205ENST00000496136 ATN1P54259 1190 aaPredicted RBP24.07■■□□□ 1.44
ECHDC3-205ENST00000496136 ZNF720Q7Z2F6 126 aa24.07■■□□□ 1.44
ECHDC3-205ENST00000496136 GLIS3Q8NEA6 775 aa24.07■■□□□ 1.44
ECHDC3-205ENST00000496136 SPIRE2Q8WWL2 714 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms