RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TMEM60Q9H2L4 133 aa8.1□□□□□ -1.11
RBM39-239ENST00000494274 FOXP1Q9H334 677 aaPredicted RBP8.1□□□□□ -1.11
RBM39-239ENST00000494274 ATP6V0A4Q9HBG4 840 aa8.1□□□□□ -1.11
RBM39-239ENST00000494274 RGS18Q9NS28 235 aa8.1□□□□□ -1.11
RBM39-239ENST00000494274 ADGRA3Q8IWK6 1321 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 IGKV6-21A0A0C4DH24 114 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 TBKBP1A7MCY6 615 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 H3BNC9 293 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 SRGAP2CP0DJJ0 459 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 FGFR1P11362 822 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 MRPS5P82675 430 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 TFF2Q03403 129 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 NBR1Q14596 966 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 PTPROQ16827 1216 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 TTC38Q5R3I4 469 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 SPOUT1Q5T280 376 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 EP400NLQ6ZTU2 488 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 EXOC8Q8IYI6 725 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 PIGOQ8TEQ8 1089 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 PRPF31Q8WWY3 499 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 ZNF689Q96CS4 500 aaPredicted RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 CCDC43Q96MW1 224 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 TBC1D32Q96NH3 1257 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 MTMR9Q96QG7 549 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 CEP89Q96ST8 783 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 HSD17B14Q9BPX1 270 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 COL25A1Q9BXS0 654 aaPredicted RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 INO80BQ9C086 356 aaPredicted RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 ALG13Q9NP73 1137 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 C1orf112Q9NSG2 853 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 LMCD1Q9NZU5 365 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 THEGQ9P2T0 379 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 NOL7Q9UMY1 257 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 KIF3AQ9Y496 699 aa8.09□□□□□ -1.11
RBM39-239ENST00000494274 MRPL42Q9Y6G3 142 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 LAMA2P24043 3122 aaKnown RBP8.09□□□□□ -1.11
RBM39-239ENST00000494274 MYH7BA7E2Y1 1941 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 POTEMA6NI47 508 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 C9IYK1 514 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 H3BQV1 296 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 RB1P06400 928 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 OR52Z1P0C646 297 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 GJB2P29033 226 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 RFC5P40937 340 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 MCM2P49736 904 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 FAM189BP81408 668 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 DSC3Q14574 896 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 LONRF3Q496Y0 759 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 FAM43BQ6ZT52 329 aaPredicted RBP8.08□□□□□ -1.12
RBM39-239ENST00000494274 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 CATSPER4Q7RTX7 472 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 CMTR2Q8IYT2 770 aaKnown RBP8.08□□□□□ -1.12
RBM39-239ENST00000494274 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 ERMNQ8TAM6 284 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 ATXN2LQ8WWM7 1075 aaKnown RBP8.08□□□□□ -1.12
RBM39-239ENST00000494274 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
RBM39-239ENST00000494274 HLA-CQ95604 372 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 ASB2Q96Q27 587 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 TMEM161AQ9NX61 479 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 PIN4Q9Y237 131 aaKnown RBP8.08□□□□□ -1.12
RBM39-239ENST00000494274 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 COL4A3BPQ9Y5P4 624 aa8.08□□□□□ -1.12
RBM39-239ENST00000494274 SCN5AQ14524 2016 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 GRM6O15303 877 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 ASAP2O43150 1006 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 LYPLA2O95372 231 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 SFPQP23246 707 aaKnown RBP eCLIP8.07□□□□□ -1.12
RBM39-239ENST00000494274 U2AF2P26368 475 aaKnown RBP eCLIP8.07□□□□□ -1.12
RBM39-239ENST00000494274 LAMTOR4Q0VGL1 99 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 EMC2Q15006 297 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 TWF2Q6IBS0 349 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 ZNF410Q86VK4 478 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 CATSPER3Q86XQ3 398 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 ECHDC2Q86YB7 292 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 ABI1Q8IZP0 508 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 RNF149Q8NC42 400 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 TET1Q8NFU7 2136 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 MICAL1Q8TDZ2 1067 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 TCP11Q8WWU5 503 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 PSPC1Q8WXF1 523 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 MRPL38Q96DV4 380 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 MTRQ99707 1265 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 DHX33Q9H6R0 707 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 ELAC1Q9H777 363 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 RC3H2Q9HBD1 1191 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 CHST12Q9NRB3 414 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 ANKEF1Q9NU02 776 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 TYW1Q9NV66 732 aaKnown RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 DACT1Q9NYF0 836 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 COG5Q9UP83 839 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 PLAGL2Q9UPG8 496 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms