RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 HIP1RO75146 1068 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 PPP1R37O75864 691 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 KIF4AO95239 1232 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 FTCDO95954 541 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 CAPN2P17655 700 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 SFNP31947 248 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 QARSP47897 775 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 JAK3P52333 1124 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 BFSP1Q12934 665 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ENOX2Q16206 610 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 SND1Q7KZF4 910 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 RDM1Q8NG50 284 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 INPP4AQ96PE3 977 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 MAF1Q9H063 256 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 GDF3Q9NR23 364 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 RBM12Q9NTZ6 932 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 SUCLA2Q9P2R7 463 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 APEX2Q9UBZ4 518 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 EXOC7Q9UPT5 735 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 UBIAD1Q9Y5Z9 338 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 F8VZ95 297 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 PMM2O15305 246 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 MAFGO15525 162 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 CTNND1O60716 968 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ZBED4O75132 1171 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 SYF2O95926 243 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 TMEM253P0C7T8 217 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ITGB5P18084 799 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 RPS12P25398 132 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ABCD1P33897 745 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 MYL7Q01449 175 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 KCNA1Q09470 495 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ZYXQ15942 572 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ZC2HC1CQ53FD0 456 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 CIAPIN1Q6FI81 312 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 MIGA2Q7L4E1 593 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 PEX26Q7Z412 305 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 SLFN11Q7Z7L1 901 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 USP37Q86T82 979 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 LRRC57Q8N9N7 239 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 HOOK2Q96ED9 719 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 PSMB7Q99436 277 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 NAP1L3Q99457 506 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 ZNF277Q9NRM2 450 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 PGAP2Q9UHJ9 254 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 DNAJC12Q9UKB3 198 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 K7ENM7 598 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 PGRMC1O00264 195 aaKnown RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 KCNK3O14649 394 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 EVI5O60447 810 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 ZMYND10O75800 440 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 PLS3P13797 630 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 CYP2J2P51589 502 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 UBXN2AP68543 259 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 KRT76Q01546 638 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 MTMR1Q13613 665 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 CUL1Q13616 776 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 ZSCAN26Q16670 478 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 TKFCQ3LXA3 575 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 MREGQ8N565 214 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 TPCN2Q8NHX9 752 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 SLC30A5Q8TAD4 765 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 FAM76AQ8TAV0 307 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 JDP2Q8WYK2 163 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 PACSIN1Q9BY11 444 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 INTS2Q9H0H0 1204 aaKnown RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 SLC38A10Q9HBR0 1119 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 AGO4Q9HCK5 861 aaKnown RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 KCNG1Q9UIX4 513 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 TMEM59LQ9UK28 342 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
NPHP3-209ENST00000493732 ZNF536O15090 1300 aa10.49□□□□□ -0.73
NPHP3-209ENST00000493732 EP400Q96L91 3159 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 WNT10BO00744 389 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 HEXIM1O94992 359 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 GGCXP38435 758 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 PSMC5P62195 406 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MAPK7Q13164 816 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 DRAP1Q14919 205 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 EZH2Q15910 746 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 RHOT2Q8IXI1 618 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 U2AF1L4Q8WU68 220 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 CLEC4DQ8WXI8 215 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 RFFLQ8WZ73 363 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms