RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 VPS36Q86VN1 386 aa20.58■□□□□ 0.89
TSC22D4-205ENST00000493217 DNAAF5Q86Y56 855 aa20.58■□□□□ 0.89
TSC22D4-205ENST00000493217 CPXCR1Q8N123 301 aa20.58■□□□□ 0.89
TSC22D4-205ENST00000493217 LRRC57Q8N9N7 239 aa20.58■□□□□ 0.89
TSC22D4-205ENST00000493217 MAP3K20Q9NYL2 800 aaKnown RBP20.58■□□□□ 0.89
TSC22D4-205ENST00000493217 F8VZ95 297 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 CES2O00748 559 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 EVI5O60447 810 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 PHACTR2O75167 634 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 ALAS1P13196 640 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 TNFRSF8P28908 595 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 SOX5P35711 763 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 MUM1L1Q5H9M0 696 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 OLIG1Q8TAK6 271 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 SYTL5Q8TDW5 730 aaPredicted RBP20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 RAVER2Q9HCJ3 691 aaKnown RBP20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 LARSQ9P2J5 1176 aaKnown RBP20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 DBR1Q9UK59 544 aaKnown RBP20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 INTUQ9ULD6 942 aa20.58■□□□□ 0.88
TSC22D4-205ENST00000493217 CCDC66A2RUB6 948 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 GFPT2O94808 682 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 MAPTP10636 758 aaKnown RBP20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 RARRES1P49788 294 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 DNA2P51530 1060 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 BFSP1Q12934 665 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 DGKZQ13574 1117 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 IFI16Q16666 785 aaKnown RBP20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 SYCP3Q8IZU3 236 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 SLC30A5Q8TAD4 765 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 TMEM174Q8WUU8 243 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 A0A0A6YYK5 440 aaPredicted RBP20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 A0A0U1RQG5 324 aaPredicted RBP20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 AGPSO00116 658 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 EXOC3O60645 756 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 LYPLA2O95372 231 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 TRIM49P0CI25 452 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 TRIM49CP0CI26 452 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 MTMR1Q13613 665 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 GPR88Q9GZN0 384 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 DNAJC12Q9UKB3 198 aa20.57■□□□□ 0.88
TSC22D4-205ENST00000493217 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 K7ENM7 598 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 RNF40O75150 1001 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 EGFRP00533 1210 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 H2AFZP0C0S5 128 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 NOP2P46087 812 aaKnown RBP20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 QARSP47897 775 aaKnown RBP20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 DRAP1Q14919 205 aaPredicted RBP20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 RPS6KA1Q15418 735 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 H2AFVQ71UI9 128 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 MAEAQ7L5Y9 396 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 TPCN2Q8NHX9 752 aa20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 RGS17Q9UGC6 210 aaPredicted RBP20.56■□□□□ 0.88
TSC22D4-205ENST00000493217 KIF4AO95239 1232 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 EPHB4P54760 987 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 RPS6P62753 249 aaKnown RBP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 SPP2Q13103 211 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 TAAR1Q96RJ0 339 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 SYT11Q9BT88 431 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 TMEM206Q9H813 350 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 HOMER2Q9NSB8 354 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 TBC1D22BQ9NU19 505 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 APEX2Q9UBZ4 518 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 SAMM50Q9Y512 469 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 GGCXP38435 758 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 LMAN1P49257 510 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 ALCAMQ13740 583 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 TNFAIP1Q13829 316 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 PLS1Q14651 629 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 EMBQ6PCB8 327 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 SND1Q7KZF4 910 aaKnown RBP eCLIP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 USP38Q8NB14 1042 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 RDH13Q8NBN7 331 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 LNX1Q8TBB1 728 aaPredicted RBP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 INTS2Q9H0H0 1204 aaKnown RBP20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 GOLPH3Q9H4A6 298 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 TMEM59LQ9UK28 342 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 PPP1R9AQ9ULJ8 1098 aa20.55■□□□□ 0.88
TSC22D4-205ENST00000493217 GLI1P08151 1106 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 ZBTB48P10074 688 aaPredicted RBP20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 PLS3P13797 630 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 PGM5Q15124 567 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 SLFN11Q7Z7L1 901 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 LMO3Q8TAP4 145 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 JDP2Q8WYK2 163 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 RIN2Q8WYP3 895 aaPredicted RBP20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 TAF4BQ92750 862 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 GDF3Q9NR23 364 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 DAAM1Q9Y4D1 1078 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 KCNK3O14649 394 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 VCAM1P19320 739 aa20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 EIF2AK2P19525 551 aaKnown RBP20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 YWHABP31946 246 aaKnown RBP20.54■□□□□ 0.88
TSC22D4-205ENST00000493217 MYL7Q01449 175 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms