RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DDX47Q9H0S4 455 aaKnown RBP11.01□□□□□ -0.65
BRD9-209ENST00000490814 TMBIM4Q9HC24 238 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 PVALEFA0A1B0GWK0 134 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 POTECB2RU33 542 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
BRD9-209ENST00000490814 MFSD14BQ5SR56 506 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 TTBK2Q6IQ55 1244 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 RUFY4Q6ZNE9 571 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 TBC1D1Q86TI0 1168 aaPredicted RBP11.01□□□□□ -0.65
BRD9-209ENST00000490814 RAPGEF5Q92565 580 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 EBF2Q9HAK2 575 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 NOD2Q9HC29 1040 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ATP6V0A2Q9Y487 856 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 TAF1P21675 1872 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 LIN7AO14910 233 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 MYBL1P10243 752 aa11□□□□□ -0.65
BRD9-209ENST00000490814 NR2F2P24468 414 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CTCFP49711 727 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 MYBPC2Q14324 1141 aa11□□□□□ -0.65
BRD9-209ENST00000490814 LRRC55Q6ZSA7 311 aa11□□□□□ -0.65
BRD9-209ENST00000490814 LRRC45Q96CN5 670 aa11□□□□□ -0.65
BRD9-209ENST00000490814 IQCDQ96DY2 449 aa11□□□□□ -0.65
BRD9-209ENST00000490814 MASTLQ96GX5 879 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CCDC113Q9H0I3 377 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CEP72Q9P209 647 aa11□□□□□ -0.65
BRD9-209ENST00000490814 TSKSQ9UJT2 592 aa11□□□□□ -0.65
BRD9-209ENST00000490814 NUB1Q9Y5A7 615 aa11□□□□□ -0.65
BRD9-209ENST00000490814 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L15C9J2P7 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L11C9JVI0 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L18D6R9N7 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L22D6RA61 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L19D6RCP7 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L20D6RJB6 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CETN3O15182 167 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CREB3O43889 395 aa11□□□□□ -0.65
BRD9-209ENST00000490814 TLR2O60603 784 aa11□□□□□ -0.65
BRD9-209ENST00000490814 ZNF24P17028 368 aa11□□□□□ -0.65
BRD9-209ENST00000490814 ATP4AP20648 1035 aa11□□□□□ -0.65
BRD9-209ENST00000490814 PTGER2P43116 358 aa11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L24Q0WX57 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 GRM1Q13255 1194 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 ECM1Q16610 540 aa11□□□□□ -0.65
BRD9-209ENST00000490814 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
BRD9-209ENST00000490814 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
BRD9-209ENST00000490814 TAX1BP1Q86VP1 789 aa11□□□□□ -0.65
BRD9-209ENST00000490814 LARGE2Q8N3Y3 721 aa11□□□□□ -0.65
BRD9-209ENST00000490814 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
BRD9-209ENST00000490814 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
BRD9-209ENST00000490814 LRRC27Q9C0I9 530 aa11□□□□□ -0.65
BRD9-209ENST00000490814 SHANK3Q9BYB0 1731 aa11□□□□□ -0.65
BRD9-209ENST00000490814 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 SLC9A1P19634 815 aa11□□□□□ -0.65
BRD9-209ENST00000490814 GJA8P48165 433 aa11□□□□□ -0.65
BRD9-209ENST00000490814 PPP2R2AP63151 447 aa11□□□□□ -0.65
BRD9-209ENST00000490814 CYP4A11Q02928 519 aa11□□□□□ -0.65
BRD9-209ENST00000490814 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.654e-6■■■□□ 17.5
BRD9-209ENST00000490814 CCDC63Q8NA47 563 aa11□□□□□ -0.65
BRD9-209ENST00000490814 DTNBP1Q96EV8 351 aa11□□□□□ -0.65
BRD9-209ENST00000490814 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
BRD9-209ENST00000490814 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
BRD9-209ENST00000490814 FBXL5Q9UKA1 691 aa11□□□□□ -0.65
BRD9-209ENST00000490814 KRIT1O00522 736 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 CTNND1O60716 968 aaKnown RBP10.99□□□□□ -0.65
BRD9-209ENST00000490814 RAD17O75943 681 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 ANP32DO95626 131 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 ATP6V1G2O95670 118 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 ABCB4P21439 1286 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 C6orf89Q6UWU4 347 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 PEX26Q7Z412 305 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 EMILIN3Q9NT22 766 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 L3MBTL1Q9Y468 752 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 COL4A1P02462 1669 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 CAPN15O75808 1086 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 PLA2G4BP0C869 781 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 NPR1P16066 1061 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
BRD9-209ENST00000490814 SNAP25P60880 206 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 HGSNATQ68CP4 663 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 RNF10Q8N5U6 811 aaKnown RBP10.99□□□□□ -0.65
BRD9-209ENST00000490814 PHC3Q8NDX5 983 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 NEDD1Q8NHV4 660 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 CNKSR1Q969H4 720 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 ARPC5LQ9BPX5 153 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 ZFATQ9P243 1243 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 GGT7Q9UJ14 662 aa10.99□□□□□ -0.65
BRD9-209ENST00000490814 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
BRD9-209ENST00000490814 PCNTO95613 3336 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms