RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 CAMK4Q16566 473 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 PTGISQ16647 500 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 GDF6Q6KF10 455 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-221ENST00000489562 METTL13Q8N6R0 699 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 BLZF1Q9H2G9 400 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 SUGCTQ9HAC7 445 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 PARVGQ9HBI0 331 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 TMEM63CQ9P1W3 806 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 NOD1Q9Y239 953 aa15.38■□□□□ 0.05
C9orf3-221ENST00000489562 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
C9orf3-221ENST00000489562 TREHO43280 583 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 RPN1P04843 607 aaKnown RBP15.37■□□□□ 0.05
C9orf3-221ENST00000489562 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SCP2P22307 547 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 ARL2P36404 184 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 MAPK7Q13164 816 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 PTK7Q13308 1070 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SNX17Q15036 470 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SLC39A5Q6ZMH5 540 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
C9orf3-221ENST00000489562 RSPH3Q86UC2 560 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SERINC5Q86VE9 423 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 NME8Q8N427 588 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 DIS3LQ8TF46 1054 aaKnown RBP15.37■□□□□ 0.05
C9orf3-221ENST00000489562 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 IFT74Q96LB3 600 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 POLR3FQ9H1D9 316 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-221ENST00000489562 EXOC1Q9NV70 894 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 PANK4Q9NVE7 773 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 KIAA1468Q9P260 1216 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 PCDHA5Q9Y5H7 936 aa15.37■□□□□ 0.05
C9orf3-221ENST00000489562 SIP14410 1827 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 NPHP3-ACAD11A0A0J9YXS1 232 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 KLRC4O43908 158 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 CAND2O75155 1236 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 PLS3P13797 630 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 CASP1P29466 404 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 ABCD1P33897 745 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 SARSP49591 514 aaKnown RBP15.36■□□□□ 0.05
C9orf3-221ENST00000489562 CLCN3P51790 818 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 COASYQ13057 564 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 PSMD2Q13200 908 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-221ENST00000489562 TFDP1Q14186 410 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 HIC1Q14526 733 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 MAEAQ7L5Y9 396 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 ANKRD33Q7Z3H0 272 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 RPAINQ86UA6 219 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 DAW1Q8N136 415 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 LRRC71Q8N4P6 559 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 TRIML1Q8N9V2 468 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 PAWRQ96IZ0 340 aaKnown RBP15.36■□□□□ 0.05
C9orf3-221ENST00000489562 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 ZHX3Q9H4I2 956 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 OLFML3Q9NRN5 406 aa15.36■□□□□ 0.05
C9orf3-221ENST00000489562 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-221ENST00000489562 RSPH10B2B2RC85 870 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 H0YCG3 227 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 RHOBTB3O94955 611 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 RSPH10BP0C881 870 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 MAPTP10636 758 aaKnown RBP15.35■□□□□ 0.05
C9orf3-221ENST00000489562 NAMPTP43490 491 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 SMTNP53814 917 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-221ENST00000489562 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-221ENST00000489562 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 EHHADHQ08426 723 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-221ENST00000489562 KMT5BQ4FZB7 885 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 HERC4Q5GLZ8 1057 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-221ENST00000489562 ODR4Q5SWX8 454 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 CCDC155Q8N6L0 562 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 PPP1R13LQ8WUF5 828 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 SPIRE2Q8WWL2 714 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 GPRC5CQ9NQ84 441 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 AKT3Q9Y243 479 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
C9orf3-221ENST00000489562 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 M0QZ92 97 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 B4GALT4O60513 344 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 EN2P19622 333 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-221ENST00000489562 GLRA2P23416 452 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 LAMTOR4Q0VGL1 99 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 DRP2Q13474 957 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 ALCAMQ13740 583 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 FAM26FQ5R3K3 315 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 UBE2Q1Q7Z7E8 422 aa15.34■□□□□ 0.05
C9orf3-221ENST00000489562 ZNF410Q86VK4 478 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms