RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SYT2Q8N9I0 419 aaPredicted RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 SLC30A5Q8TAD4 765 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 CCT6BQ92526 530 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 SLC35C1Q96A29 364 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 CHMP6Q96FZ7 201 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 GPR101Q96P66 508 aaPredicted RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 XPO6Q96QU8 1125 aaKnown RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 NR3C1P04150 777 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 RFC4P35249 363 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 STAT1P42224 750 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 EIF6P56537 245 aaKnown RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 ZC3H12AQ5D1E8 599 aaKnown RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 TCERG1LQ5VWI1 586 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 MOXD1Q6UVY6 613 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 DPP8Q6V1X1 898 aaPredicted RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 SFR1Q86XK3 245 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 NAP1L3Q99457 506 aaPredicted RBP21.16■□□□□ 0.98
HMG20B-213ENST00000488973 FAM129AQ9BZQ8 928 aa21.16■□□□□ 0.98
HMG20B-213ENST00000488973 DNAJC8O75937 253 aaPredicted RBP21.15■□□□□ 0.98
HMG20B-213ENST00000488973 NUDT17P0C025 328 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 PPARDQ03181 441 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 CATSPER3Q86XQ3 398 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 REEP2Q9BRK0 252 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 LRRC4BQ9NT99 713 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 DNM3Q9UQ16 869 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 ATP8A1Q9Y2Q0 1164 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 PHF20L1A8MW92 1017 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 LMNB1P20700 586 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 STAT3P40763 770 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 ADCY2Q08462 1091 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 DUPD1Q68J44 220 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 ERMNQ8TAM6 284 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 LNX1Q8TBB1 728 aaPredicted RBP21.15■□□□□ 0.98
HMG20B-213ENST00000488973 RFFLQ8WZ73 363 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 TRIM51Q9BSJ1 452 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 CARD9Q9H257 536 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 HAUS2Q9NVX0 235 aa21.15■□□□□ 0.98
HMG20B-213ENST00000488973 GREB1LQ9C091 1923 aaPredicted RBP21.14■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L10C9JJH3 530 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 DDX3YO15523 660 aaKnown RBP21.14■□□□□ 0.97
HMG20B-213ENST00000488973 BUB1BO60566 1050 aaPredicted RBP21.14■□□□□ 0.97
HMG20B-213ENST00000488973 TMEM253P0C7T8 217 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 PPATQ06203 517 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 CLUL1Q15846 466 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 HVCN1Q96D96 273 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 ERP44Q9BS26 406 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 ZDHHC18Q9NUE0 388 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 ASTN1O14525 1302 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 GOLGA6L10A0A0M3HER8 536 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 FAM187AA6NFU0 413 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
HMG20B-213ENST00000488973 BACH1O14867 736 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 CAND2O75155 1236 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 RPA1P27694 616 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 DR1Q01658 176 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 SPIRE1Q08AE8 756 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 SLC35G2Q8TBE7 412 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 UIMC1Q96RL1 719 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 ANO3Q9BYT9 981 aa21.14■□□□□ 0.97
HMG20B-213ENST00000488973 TRIM6Q9C030 488 aaPredicted RBP21.14■□□□□ 0.97
HMG20B-213ENST00000488973 EVI5O60447 810 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PSMC6P62333 389 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 MFSD14BQ5SR56 506 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 CLEC10AQ8IUN9 316 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 OLIG1Q8TAK6 271 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PGM2Q96G03 612 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 LRRC4CQ9HCJ2 640 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 OSGEPQ9NPF4 335 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 ETAA1Q9NY74 926 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 DAAM1Q9Y4D1 1078 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 STK24Q9Y6E0 443 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 MYO3BQ8WXR4 1341 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L15C9J2P7 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L13C9JLJ4 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L11C9JVI0 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L18D6R9N7 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L22D6RA61 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L17D6RBQ6 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L19D6RCP7 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L20D6RJB6 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 NF2P35240 595 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 SOX5P35711 763 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 SLC16A2P36021 539 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 CASP4P49662 377 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 DRG2P55039 364 aaKnown RBP21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L24Q0WX57 530 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PABPC4Q13310 644 aaKnown RBP eCLIP21.13■□□□□ 0.979e-12■□□□□ 11.1
HMG20B-213ENST00000488973 DHX34Q14147 1143 aaKnown RBP21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PLS1Q14651 629 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 DCAF12L1Q5VU92 463 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 GJB7Q6PEY0 223 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 USP17L6PQ6QN14 398 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 EPB41L4BQ9H329 900 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PABPC3Q9H361 631 aaKnown RBP21.13■□□□□ 0.97
HMG20B-213ENST00000488973 PPP1R9AQ9ULJ8 1098 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 NR2E1Q9Y466 385 aa21.13■□□□□ 0.97
HMG20B-213ENST00000488973 TBX3O15119 743 aa21.12■□□□□ 0.97
HMG20B-213ENST00000488973 CTNND1O60716 968 aaKnown RBP21.12■□□□□ 0.97
HMG20B-213ENST00000488973 GPSM2P81274 684 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms