RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CGNQ9P2M7 1197 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 NRCAMQ92823 1304 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 A0A087WWV3 80 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 PDXKO00764 312 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 RPLP2P05387 115 aaKnown RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 ELNP15502 786 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 CAPN2P17655 700 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 GRK4P32298 578 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 NAMPTP43490 491 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 IER5Q5VY09 327 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 FAM178BQ8IXR5 827 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 NOC3LQ8WTT2 800 aaKnown RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 P2RX5Q93086 422 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 TSEN34Q9BSV6 310 aaKnown RBP11.82□□□□□ -0.52
USP11-209ENST00000488848 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 RNPEPQ9H4A4 650 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 SPC25Q9HBM1 224 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 PTPN22Q9Y2R2 807 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
USP11-209ENST00000488848 ZMYM2Q9UBW7 1377 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 ASAP2O43150 1006 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 ZEB2O60315 1214 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 CABYRO75952 493 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 PIGRP01833 764 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 INHAP05111 366 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 INSRRP14616 1297 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 PTGS1P23219 599 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 HOXD13P35453 343 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 POLGP54098 1239 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 TBC1D8BQ0IIM8 1120 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 TRIM32Q13049 653 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 DMP1Q13316 513 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 MXD4Q14582 209 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 MARCH8Q5T0T0 291 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 LHX8Q68G74 356 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 LUZP1Q86V48 1076 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 SLC9A9Q8IVB4 645 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 MAP4K3Q8IVH8 894 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 SMYD4Q8IYR2 804 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 AOPEPQ8N6M6 819 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 GOLGA5Q8TBA6 731 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 FGFBP2Q9BYJ0 223 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
USP11-209ENST00000488848 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
USP11-209ENST00000488848 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 BRCA2P51587 3418 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 MOXD2PA6NHM9 499 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 SORBS3O60504 671 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 ZNF286BP0CG31 522 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 GLRA2P23416 452 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 NPTX2P47972 431 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 PSEN2P49810 448 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 CASP5P51878 434 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 SMTNP53814 917 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 ENPEPQ07075 957 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 SPAG1Q07617 926 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 KNOP1Q1ED39 458 aaKnown RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 MYCT1Q8N699 235 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 PCSK9Q8NBP7 692 aaKnown RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 GLIS3Q8NEA6 775 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 LENG1Q96BZ8 264 aaPredicted RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 CEP63Q96MT8 703 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 SEMA6BQ9H3T3 888 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 THAP9Q9H5L6 903 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 TMEM134Q9H6X4 195 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 TMEM206Q9H813 350 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 MRPL44Q9H9J2 332 aaKnown RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 TYW1Q9NV66 732 aaKnown RBP11.8□□□□□ -0.52
USP11-209ENST00000488848 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
USP11-209ENST00000488848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms