RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 OTOL1A6NHN0 477 aaPredicted RBP6□□□□□ -1.45
ITGB1-214ENST00000488427 LAMTOR5O43504 91 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 NRP2O60462 931 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 APOL3O95236 402 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 CELA3BP08861 270 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 PTX3P26022 381 aaPredicted RBP6□□□□□ -1.45
ITGB1-214ENST00000488427 CNR2P34972 360 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 ADCY8P40145 1251 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 ADCYAP1R1P41586 468 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 KCNQ1P51787 676 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 SMAD3P84022 425 aaKnown RBP6□□□□□ -1.45
ITGB1-214ENST00000488427 NFKB2Q00653 900 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 CD83Q01151 205 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 SKOR2Q2VWA4 1001 aaPredicted RBP6□□□□□ -1.45
ITGB1-214ENST00000488427 CREB3L3Q68CJ9 461 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 KIAA1841Q6NSI8 718 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 BMP8AQ7Z5Y6 402 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 FILIP1Q7Z7B0 1213 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 BORCS6Q96GS4 357 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 HIST1H2AHQ96KK5 128 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 HIST1H2AJQ99878 128 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 SEC61A2Q9H9S3 476 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 EMC7Q9NPA0 242 aa6□□□□□ -1.45
ITGB1-214ENST00000488427 ATAD2BQ9ULI0 1458 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 NCLP19338 710 aaKnown RBP5.99□□□□□ -1.45
ITGB1-214ENST00000488427 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
ITGB1-214ENST00000488427 XPAP23025 273 aaPredicted RBP5.99□□□□□ -1.45
ITGB1-214ENST00000488427 PPP2CBP62714 309 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 PPP2CAP67775 309 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 TERF2Q15554 542 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 RNF219Q5W0B1 726 aaPredicted RBP5.99□□□□□ -1.45
ITGB1-214ENST00000488427 KLHDC10Q6PID8 442 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 LRSAM1Q6UWE0 723 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 GLB1LQ6UWU2 654 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 RASSF3Q86WH2 238 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 ATL2Q8NHH9 583 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 ZMAT4Q9H898 229 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 SPTLC3Q9NUV7 552 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 MSRAQ9UJ68 235 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
ITGB1-214ENST00000488427 INVSQ9Y283 1065 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
ITGB1-214ENST00000488427 SYNJ2O15056 1496 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 DAPK3O43293 454 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 PRPF6O94906 941 aaKnown RBP5.98□□□□□ -1.45
ITGB1-214ENST00000488427 PLATP00750 562 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 CSF2RBP32927 897 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 RAC3P60763 192 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 CCDC178Q5BJE1 867 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 SLFN13Q68D06 897 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 IQSEC1Q6DN90 963 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 ESRP1Q6NXG1 681 aaKnown RBP5.98□□□□□ -1.45
ITGB1-214ENST00000488427 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
ITGB1-214ENST00000488427 AFAP1L2Q8N4X5 818 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 OR5AN1Q8NGI8 311 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 MBD6Q96DN6 1003 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 PAWRQ96IZ0 340 aaKnown RBP5.98□□□□□ -1.45
ITGB1-214ENST00000488427 ACAP3Q96P50 834 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 OR10A2Q9H208 303 aa5.98□□□□□ -1.45
ITGB1-214ENST00000488427 H2AFY2Q9P0M6 372 aaPredicted RBP5.98□□□□□ -1.45
ITGB1-214ENST00000488427 KDM1AO60341 852 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 B4GALT3O60512 393 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 B4GALT4O60513 344 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 GPR15P49685 360 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 RGS3P49796 1198 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 EPHB4P54760 987 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 NRG3P56975 720 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 GJC2Q5T442 439 aaPredicted RBP5.97□□□□□ -1.45
ITGB1-214ENST00000488427 BROXQ5VW32 411 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 SPATS2Q86XZ4 545 aaKnown RBP5.97□□□□□ -1.45
ITGB1-214ENST00000488427 UBR7Q8N806 425 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 WDR66Q8TBY9 1149 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 RTF1Q92541 710 aaKnown RBP5.97□□□□□ -1.45
ITGB1-214ENST00000488427 DYDC2Q96IM9 177 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 MYL10Q9BUA6 226 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 POFUT1Q9H488 388 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 POLR3BQ9NW08 1133 aaPredicted RBP5.97□□□□□ -1.45
ITGB1-214ENST00000488427 FAM184BQ9ULE4 1060 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 NR2E1Q9Y466 385 aa5.97□□□□□ -1.45
ITGB1-214ENST00000488427 SBNO2Q9Y2G9 1366 aa5.96□□□□□ -1.45
ITGB1-214ENST00000488427 NPEPPSL1A6NEC2 478 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 NEMP1O14524 444 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 TGM5O43548 720 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 FSBPO95073 299 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 ADRB1P08588 477 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 ZNF827Q17R98 1081 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 AGBL4Q5VU57 503 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 TRIM68Q6AZZ1 485 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 USP30Q70CQ3 517 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 KANSL1Q7Z3B3 1105 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 CDYL2Q8N8U2 506 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 GCDHQ92947 438 aaPredicted RBP5.96□□□□□ -1.46
ITGB1-214ENST00000488427 WDR92Q96MX6 357 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 PITHD1Q9GZP4 211 aaPredicted RBP5.96□□□□□ -1.46
ITGB1-214ENST00000488427 MTG2Q9H4K7 406 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 PUF60Q9UHX1 559 aaKnown RBP5.96□□□□□ -1.46
ITGB1-214ENST00000488427 DENND2AQ9ULE3 1009 aa5.96□□□□□ -1.46
ITGB1-214ENST00000488427 K7ESM1 405 aa5.95□□□□□ -1.46
ITGB1-214ENST00000488427 ARHGAP6O43182 974 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms