RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 PDILTQ8N807 584 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 IL23AQ9NPF7 189 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 KRT18P05783 430 aaKnown RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 ACRP10323 421 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 ACTN1P12814 892 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 CYP11B2P19099 503 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 MXD4Q14582 209 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 ODR4Q5SWX8 454 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 KCNK18Q7Z418 384 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 SYT2Q8N9I0 419 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 PRPF31Q8WWY3 499 aaKnown RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 RAD54LQ92698 747 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
C9orf3-219ENST00000488186 STK17AQ9UEE5 414 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 COL4A3BPQ9Y5P4 624 aa17.47■□□□□ 0.39
C9orf3-219ENST00000488186 FGBP02675 491 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 GHRP10912 638 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 CRYBB1P53674 252 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-219ENST00000488186 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-219ENST00000488186 DRP2Q13474 957 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 TFDP1Q14186 410 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 MCM6Q14566 821 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 SHC4Q6S5L8 630 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 SV2BQ7L1I2 683 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 IQUBQ8NA54 791 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 USP38Q8NB14 1042 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 LARP4BQ92615 738 aaKnown RBP17.46■□□□□ 0.39
C9orf3-219ENST00000488186 ZNF668Q96K58 619 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-219ENST00000488186 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 NLRP4Q96MN2 994 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 OSMRQ99650 979 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-219ENST00000488186 EVPLQ92817 2033 aa17.46■□□□□ 0.39
C9orf3-219ENST00000488186 NBNO60934 754 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 CMA1P23946 247 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 GPC3P51654 580 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 MGAT3Q09327 533 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 LAMTOR4Q0VGL1 99 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 PSRC1Q6PGN9 363 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-219ENST00000488186 TRAF7Q6Q0C0 670 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 GPBP1Q86WP2 473 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 SEPT8Q92599 483 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 KIFAP3Q92845 792 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 TIPINQ9BVW5 301 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-219ENST00000488186 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-219ENST00000488186 MTIF3Q9H2K0 278 aaKnown RBP17.45■□□□□ 0.38
C9orf3-219ENST00000488186 XPNPEP1Q9NQW7 623 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 KCND2Q9NZV8 630 aa17.45■□□□□ 0.38
C9orf3-219ENST00000488186 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
C9orf3-219ENST00000488186 GPR32O75388 356 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 ARL2P36404 184 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 SLC12A3P55017 1021 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 RAD51AP2Q09MP3 1159 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 NFX1Q12986 1120 aaKnown RBP17.44■□□□□ 0.38
C9orf3-219ENST00000488186 PAK2Q13177 524 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 FBXO47Q5MNV8 452 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 RASIP1Q5U651 963 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 GPR153Q6NV75 609 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 TSHZ1Q6ZSZ6 1077 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 RNF149Q8NC42 400 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 DHX58Q96C10 678 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
C9orf3-219ENST00000488186 LRRC27Q9C0I9 530 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 CDHR5Q9HBB8 845 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 GPRC5CQ9NQ84 441 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 KCNH3Q9ULD8 1083 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 SQORQ9Y6N5 450 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
C9orf3-219ENST00000488186 A0A087WZ62 844 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 A0A1B0GVL5 298 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 ZBBXA8MT70 800 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 GPR182O15218 404 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 HIP1RO75146 1068 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 CXCL10P02778 98 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 AMPD3Q01432 767 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 IKBKEQ14164 716 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 LPIN1Q14693 890 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 PPP2R5AQ15172 486 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 CNKSR3Q6P9H4 555 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 C16orf59Q7L2K0 433 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 CEP57L1Q8IYX8 460 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 FSIP1Q8NA03 581 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms