RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 FAM49AQ9H0Q0 323 aaPredicted RBP25.31■■□□□ 1.64
NBPF3-212ENST00000486229 HIPK3Q9H422 1215 aa25.31■■□□□ 1.64
NBPF3-212ENST00000486229 SUCLA2Q9P2R7 463 aaPredicted RBP25.31■■□□□ 1.64
NBPF3-212ENST00000486229 ODF2LQ9ULJ1 636 aa25.31■■□□□ 1.64
NBPF3-212ENST00000486229 A0A087WWV3 80 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 ZNF202O95125 648 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 HIC1Q14526 733 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 DHX8Q14562 1220 aaKnown RBP25.3■■□□□ 1.64
NBPF3-212ENST00000486229 NAALADL2Q58DX5 795 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 C1orf186Q6ZWK4 172 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 LINC01465Q8N7H1 131 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 DNAJB3Q8WWF6 145 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 IFT74Q96LB3 600 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 PRDM5Q9NQX1 630 aaPredicted RBP25.3■■□□□ 1.64
NBPF3-212ENST00000486229 PDLIM7Q9NR12 457 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 TBX21Q9UL17 535 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 UNC80Q8N2C7 3258 aa25.3■■□□□ 1.64
NBPF3-212ENST00000486229 A0A087X0B3 334 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 KINO60870 393 aaKnown RBP25.29■■□□□ 1.64
NBPF3-212ENST00000486229 TBCAO75347 108 aaKnown RBP25.29■■□□□ 1.64
NBPF3-212ENST00000486229 RAG1P15918 1043 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 ODR4Q5SWX8 454 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 FAM102BQ5T8I3 360 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 ZNF410Q86VK4 478 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 C7orf61Q8IZ16 206 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 KIAA0319LQ8IZA0 1049 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 LRRC71Q8N4P6 559 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 CNNM3Q8NE01 707 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 TIGD1Q96MW7 591 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 KBTBD4Q9NVX7 518 aa25.29■■□□□ 1.64
NBPF3-212ENST00000486229 MYH11P35749 1972 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 SELPP16109 830 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 SCP2P22307 547 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 CLCN3P51790 818 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 MRPS6P82932 125 aaKnown RBP25.28■■□□□ 1.64
NBPF3-212ENST00000486229 RUFY4Q6ZNE9 571 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 LRCH3Q96II8 777 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 SCLT1Q96NL6 688 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 CTAGE1Q96RT6 745 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 NOC4LQ9BVI4 516 aaKnown RBP25.28■■□□□ 1.64
NBPF3-212ENST00000486229 INO80BQ9C086 356 aaPredicted RBP25.28■■□□□ 1.64
NBPF3-212ENST00000486229 LARSQ9P2J5 1176 aaKnown RBP25.28■■□□□ 1.64
NBPF3-212ENST00000486229 COL4A3BPQ9Y5P4 624 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 PHLPP2Q6ZVD8 1323 aa25.28■■□□□ 1.64
NBPF3-212ENST00000486229 RSPH10B2B2RC85 870 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 RSPH10BP0C881 870 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 CKBP12277 381 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 ABCD1P33897 745 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 RFC2P35250 354 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 POU5F1BQ06416 359 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 FAM26DQ5JW98 314 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 USP38Q8NB14 1042 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 CCDC47Q96A33 483 aaKnown RBP25.27■■□□□ 1.64
NBPF3-212ENST00000486229 TMEM143Q96AN5 459 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 RUSC1Q9BVN2 902 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 POLR3FQ9H1D9 316 aaPredicted RBP25.27■■□□□ 1.64
NBPF3-212ENST00000486229 XPNPEP1Q9NQW7 623 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 TRPV2Q9Y5S1 764 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 SQORQ9Y6N5 450 aa25.27■■□□□ 1.64
NBPF3-212ENST00000486229 H0YCG3 227 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 FAM13AO94988 1023 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 TIMP1P01033 207 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 ARL2P36404 184 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 TRIM71Q2Q1W2 868 aaKnown RBP25.26■■□□□ 1.63
NBPF3-212ENST00000486229 KRBA2Q6ZNG9 492 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 LRRC8DQ7L1W4 858 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 RHPN2Q8IUC4 686 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 FMR1NBQ8N0W7 255 aaPredicted RBP25.26■■□□□ 1.63
NBPF3-212ENST00000486229 TMEM199Q8N511 208 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 PRPF31Q8WWY3 499 aaKnown RBP25.26■■□□□ 1.63
NBPF3-212ENST00000486229 CELF4Q9BZC1 486 aaKnown RBP25.26■■□□□ 1.63
NBPF3-212ENST00000486229 GOLPH3LQ9H4A5 285 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 SERTAD1Q9UHV2 236 aa25.26■■□□□ 1.63
NBPF3-212ENST00000486229 ACTN4O43707 911 aaKnown RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 GAP43P17677 238 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 CRYBB1P53674 252 aaPredicted RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 SMTNP53814 917 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 DMP1Q13316 513 aaPredicted RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 CNNM4Q6P4Q7 775 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 CCDC65Q8IXS2 484 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 ELOA2Q8IYF1 753 aaPredicted RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 NLRP7Q8WX94 980 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 DHX38Q92620 1227 aaKnown RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 DDX12PQ92771 950 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 GCOM2Q9BZD3 368 aaPredicted RBP25.25■■□□□ 1.63
NBPF3-212ENST00000486229 C2orf40Q9H1Z8 148 aa25.25■■□□□ 1.63
NBPF3-212ENST00000486229 HIP1RO75146 1068 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 GADD45BO75293 160 aaPredicted RBP25.24■■□□□ 1.63
NBPF3-212ENST00000486229 MBD3O95983 291 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 PHKA2P46019 1235 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 NLRP11P59045 1033 aaKnown RBP25.24■■□□□ 1.63
NBPF3-212ENST00000486229 LAMTOR4Q0VGL1 99 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 PCBP1Q15365 356 aaKnown RBP eCLIP25.24■■□□□ 1.63
NBPF3-212ENST00000486229 LONRF3Q496Y0 759 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 MAEAQ7L5Y9 396 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 ENGASEQ8NFI3 743 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 C7orf25Q9BPX7 421 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 LBHD1Q9BQE6 289 aaPredicted RBP25.24■■□□□ 1.63
NBPF3-212ENST00000486229 PARVGQ9HBI0 331 aa25.24■■□□□ 1.63
NBPF3-212ENST00000486229 LMBRD1Q9NUN5 540 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms