RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 SLC16A4O15374 487 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 PPP1R37O75864 691 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 KRT31Q15323 416 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 DGKDQ16760 1214 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 SPC24Q8NBT2 197 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 SLC7A3Q8WY07 619 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 MRFAP1L1Q96HT8 127 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 KIFC3Q9BVG8 833 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 SRRDQ9UH36 339 aa15.9■□□□□ 0.14
COL9A1-207ENST00000486080 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 HBP1O60381 514 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 MAFO75444 373 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 MAPTP10636 758 aaKnown RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 RFC5P40937 340 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 TBC1D8BQ0IIM8 1120 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 DRP2Q13474 957 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 PTPN21Q16825 1174 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 HAUS6Q7Z4H7 955 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 ASAP3Q8TDY4 903 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 INTS13Q9NVM9 706 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 TSKSQ9UJT2 592 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 PCDHB13Q9Y5F0 798 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 KAT6AQ92794 2004 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 CENPFP49454 3210 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 H3BRB1 525 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 AKR1A1P14550 325 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 INSRRP14616 1297 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 ARL2P36404 184 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 NCKAP1LP55160 1127 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 BEX3Q00994 111 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 NOC3LQ8WTT2 800 aaKnown RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 ZNF296Q8WUU4 475 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 AP5M1Q9H0R1 490 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 TUT1Q9H6E5 874 aaKnown RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 LIMA1Q9UHB6 759 aaKnown RBP15.89■□□□□ 0.13
COL9A1-207ENST00000486080 NRBP1Q9UHY1 535 aa15.89■□□□□ 0.13
COL9A1-207ENST00000486080 PDXKO00764 312 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 CNGA1P29973 690 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 RTP1P59025 263 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 IGBP1P78318 339 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-207ENST00000486080 FOXR2Q6PJQ5 311 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 STXBP4Q6ZWJ1 553 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 TMEM161BQ8NDZ6 487 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 NTPCRQ9BSD7 190 aaKnown RBP15.88■□□□□ 0.13
COL9A1-207ENST00000486080 SUGCTQ9HAC7 445 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 C17orf75Q9HAS0 396 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 KMT5AQ9NQR1 393 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 TYW1Q9NV66 732 aaKnown RBP15.88■□□□□ 0.13
COL9A1-207ENST00000486080 TAB2Q9NYJ8 693 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 UBE4BO95155 1302 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 ADGRA3Q8IWK6 1321 aa15.88■□□□□ 0.13
COL9A1-207ENST00000486080 IGKV6-21A0A0C4DH24 114 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 LRRC10BA6NIK2 292 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 ADCY3O60266 1144 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 FKTNO75072 461 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 GLRA2P23416 452 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 HOXD10P28358 340 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CDC25BP30305 580 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 SMTNP53814 917 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 GTF2BQ00403 316 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 FKBP3Q00688 224 aaKnown RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 SPAG1Q07617 926 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 LRRC71Q8N4P6 559 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 DNAJC5GQ8N7S2 189 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 PPP1R13LQ8WUF5 828 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 IFT74Q96LB3 600 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CNOT6LQ96LI5 555 aaKnown RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 VPS16Q9H269 839 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 ST6GALNAC4Q9H4F1 302 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 ZNF215Q9UL58 517 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 Q9Y3F1 56 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 PPME1Q9Y570 386 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 A0A1B0GTH6 734 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CLIC2O15247 247 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 TEX33O43247 280 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CBFA2T2O43439 604 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 EEF1GP26641 437 aaKnown RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CCND3P30281 292 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 COPB1P53618 953 aaKnown RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 CHMP4BP1P59074 171 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 ADAM9Q13443 819 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 NR1I3Q14994 352 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 EDRF1Q3B7T1 1238 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 KAT2BQ92831 832 aa15.87■□□□□ 0.13
COL9A1-207ENST00000486080 MAGEC2Q9UBF1 373 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-207ENST00000486080 DENND3A2RUS2 1198 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms